Gene Information

Name : Dhaf_2088 (Dhaf_2088)
Accession : YP_002458561.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2251481 - 2252284 bp
Length : 804 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: aoe:Clos_2428 ABC transporter

DNA sequence : 
ATGAAAAAAACACCTCTACTTTCGGCCAGCCATGTGGTGGCCGGTTATGATCATAAAATTATTCTCAATACCATCGATCT
GGTGATTCCCAGCAATAAAATCAGTGTGATCATCGGAGCCAATGCCTGTGGTAAATCCACCTTGTTAAAAACTCTGGCCA
GGCTGATCAAACCTGTTTCCGGTGAGGTTGCTCTTGACGGCAAGCCCATCAGCACCATTCCCCCCAAACAGCTGGCCCGG
GTTCTGGGCTTGCTTCCCCAGTCTCCGGTGGTCCCGGAAGGAATCGCCGTGGCGGACCTGGTTTCCCGGGGAAGGTTTCC
CTACCAGGGCTTTCTTAAGGGCTTAGGGAAAAAGGATTATGAGGCTGTGGAAGAGGCTCTGGAGATTATGGGAATCACAG
AACTTGCCAACCGCAGTGTGGATGAATTGTCGGGAGGCCAGCGTCAGAGGGTCTGGATCGCCATGGCTCTCGCCCAGCAG
ACAGATATTCTGCTCCTGGATGAACCGACTACCTTTCTAGACATCACCTATCAGGTGGAAATTCTGGATCTGCTGACGGA
TCTGAATCGGAAGCGGGGGACCACTATCGTCATGGTCCTTCACGATATCAACCTGTCGGCCCGCTATGCGGATTATATCT
TTGCCGTTCATCAAGGGAATCTGATTGCCCAGGGAGCTCCTGGGGAGATTATCACCGCAGATTTGATGAAACAGGTCTTT
GGACTGGACTGTGTGGTGGCCCGGGACCCGGTATCCGGTTCACCCTTTATTGTACCGCGGGGAAGATATCATATCACTGC
TTAG

Protein sequence : 
MKKTPLLSASHVVAGYDHKIILNTIDLVIPSNKISVIIGANACGKSTLLKTLARLIKPVSGEVALDGKPISTIPPKQLAR
VLGLLPQSPVVPEGIAVADLVSRGRFPYQGFLKGLGKKDYEAVEEALEIMGITELANRSVDELSGGQRQRVWIAMALAQQ
TDILLLDEPTTFLDITYQVEILDLLTDLNRKRGTTIVMVLHDINLSARYADYIFAVHQGNLIAQGAPGEIITADLMKQVF
GLDCVVARDPVSGSPFIVPRGRYHITA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-78 59
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-78 59
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-67 52
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-51 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-51 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-52 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-52 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_2088 YP_002458561.1 ABC transporter BAC0164 Protein 2e-51 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_2088 YP_002458561.1 ABC transporter VFG0925 Protein 2e-64 49
Dhaf_2088 YP_002458561.1 ABC transporter VFG1042 Protein 2e-51 45