Gene Information

Name : Dhaf_2085 (Dhaf_2085)
Accession : YP_002458558.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0614
EC number : -
Position : 2248379 - 2249443 bp
Length : 1065 bp
Strand : +
Note : PFAM: periplasmic binding protein; KEGG: aoe:Clos_2431 periplasmic binding protein

DNA sequence :
ATGATGAAATTAAAAAAACTAATGGGTTCGATTTTAGTCATTGCCTTATCATTATCGATAACTGCGTGTTCGACAAGTGG
TCTATCCGGGCAGGATAACCTGCCGGGGGGCGAAGGGGTATCAGCCGGCACAGGTTCTGAGCAGGGGGAAGTGACGTATC
CCCTAAGGATTAAGCATGCCTTTGGTGTGACCGTGATTGAAAGCAAACCGGAACGGGTTGCCACCATTTCCTGGGGGAAC
CAGGATATACCTTTAGCTTTAGGTGTGATTCCAGTGGGGGTGTCCAAGGCCAATTATGGGGTGACCGACGACAGCGGTTT
GCTGCCCTGGACGCTGGAAGGGTTTAAAAAGCTGGGTGTAGAGAACCCTGTTCTGTTTAACGATACCGACGGCTTGGATT
TTGAAGCGATCAGTGATGTCCAGCCGGATGTAATTCTGGCGGCTTACTCAGGAATCACCCAGGAAGAATACGATTTATTG
AATCAAATCGCTCCCGTTGTTGCCTATCCCACCGTGGCCTGGCAGACTTACTGGCGTGATCAGATCGTTATGGATGCCAC
TGGAATGGGCATGGAGGCAGAAGGCGAGGAGCTGGTCTCTGAGCTGGAAAAGCTGATCACTAAAAAAATTGCTGCCTATC
CTCAGATGACCGGCAAGAATGCGGCCTTCTTCTATTTTATCCCCACCGATTTAGGCAAGTTCTATGTTTATCTGCCCACG
GATCCCCGAGCTGCTTATCTGACGGATCTGGGGTTAAAGGTTCCGGAAAGTGTAGCTGAACTTGCTAAAGACTCTGCCAG
CTTTGCCATTGAACTGAGTGCGGAGAATGTGGATATCCTGAAGGACGTGGATATAATCATTGCCTATGGTGATGAAGCCT
TGCTGAAAAGCTTGCAGGCCGATCCGCTGATGGGTACATTGCCTGCCATTCAGAGAGGTTCAGTGGCTATGATTGAGGAT
GGAACTCCCCTGGCTGCTTCCGGTACTCCCAGTGCTCTGTCCATTCCGGCTACCATCGATGATTACTTAAGCATCATTGG
CAAAGCCGCTGACTGGGTGCGATGA

Protein sequence :
MMKLKKLMGSILVIALSLSITACSTSGLSGQDNLPGGEGVSAGTGSEQGEVTYPLRIKHAFGVTVIESKPERVATISWGN
QDIPLALGVIPVGVSKANYGVTDDSGLLPWTLEGFKKLGVENPVLFNDTDGLDFEAISDVQPDVILAAYSGITQEEYDLL
NQIAPVVAYPTVAWQTYWRDQIVMDATGMGMEAEGEELVSELEKLITKKIAAYPQMTGKNAAFFYFIPTDLGKFYVYLPT
DPRAAYLTDLGLKVPESVAELAKDSASFAIELSAENVDILKDVDIIIAYGDEALLKSLQADPLMGTLPAIQRGSVAMIED
GTPLAASGTPSALSIPATIDDYLSIIGKAADWVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09530 YP_002510936.1 iron-siderophore binding lipoprotein Virulence PPI-1 Protein 2e-66 49
SP_1032 NP_345507.1 iron-compound ABC transporter iron compound-binding protein Virulence PPI-1 Protein 2e-66 49