Gene Information

Name : Dhaf_1814 (Dhaf_1814)
Accession : YP_002458294.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1941019 - 1941846 bp
Length : 828 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbb:CLD_0077 ferrichrome ABC transporter ATP-binding protein

DNA sequence : 
ATGAACAGTATTGCCACAGAGTGTCTGGCCATCGCCTATGAAGATAAAATGGTGGTGGACAATCTGGATATGCAGATTCC
CCAGGGAAAGATCACCACCATTATCGGAGCCAACGGCTGCGGAAAATCAACGGTTTTGAAGGCTGTGGGGCGCATCCTCA
AGCCTAAGGGAGGCATGGTCTATCTGAACGGCGAGGATATCCGGCGCCTGTCCACCAAGGAAGTGGCCCAGAAGATGGCG
ATTCTGCCCCAGTCTCCCCAGGCTCCGGCCGGTTTGACGGTAGGTGAATTGGTGGCCTACGGGCGCTTTCCTCATCAGCG
GGGCATGGGCAAGCTTAAGGCCGGGGATAAGAAGATCATCGCCTGGGCCCTGGAGGTAACCAAACTGACGGAATTGGAAA
CGACGGCCGTGGATAATCTTTCCGGAGGCCAGCGTCAACGGGTCTGGATCGCCATGGCCCTGGCCCAGCAGACGGATCTG
ATCCTCCTCGATGAGCCTACCACCTATCTGGATCTCTCTTATCAGCTGGAAGTGTTGCAGCTGCTCTACCAGCTCAACCG
GGAACAGGGCTGCACCATCGTCATGGTCCTCCACGATCTGAACCTGGCGGCCAGGTTTGCCGACTATATGGTGGCCATCC
GGGGCGGGAAAATCATCCGTCACGGAACGCCGGAGGAAGTAATGACCGTCGAGGTATTGCGGGAAGCCTTCCAGATTGAG
GCGATGATTATTAAGGAATCCCGGACCGGGAGGCCTACTTGTGTTTTCTATGACCTGATCGATCAGCAGAAGCAGCAAAA
GAAAGTATCCGGAGGAACTTTGACATGA

Protein sequence : 
MNSIATECLAIAYEDKMVVDNLDMQIPQGKITTIIGANGCGKSTVLKAVGRILKPKGGMVYLNGEDIRRLSTKEVAQKMA
ILPQSPQAPAGLTVGELVAYGRFPHQRGMGKLKAGDKKIIAWALEVTKLTELETTAVDNLSGGQRQRVWIAMALAQQTDL
ILLDEPTTYLDLSYQLEVLQLLYQLNREQGCTIVMVLHDLNLAARFADYMVAIRGGKIIRHGTPEEVMTVEVLREAFQIE
AMIIKESRTGRPTCVFYDLIDQQKQQKKVSGGTLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-43 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-48 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-48 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-43 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-43 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-44 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-44 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-43 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-42 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-42 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-42 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_1814 YP_002458294.1 ABC transporter BAC0164 Protein 1e-43 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_1814 YP_002458294.1 ABC transporter VFG0925 Protein 1e-45 47
Dhaf_1814 YP_002458294.1 ABC transporter VFG1042 Protein 9e-44 45