Gene Information

Name : Dhaf_1663 (Dhaf_1663)
Accession : YP_002458145.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Resistance
Product : van Willebrand factor A
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2720
EC number : -
Position : 1778711 - 1779541 bp
Length : 831 bp
Strand : +
Note : PFAM: van Willebrand factor A; KEGG: efa:EF2296 vancomycin B-type resistance protein VanW

DNA sequence :
ATGAAAAGAAAAAGATTGACTCAGTTATTCCCATTCCTGCTGCCGGTCCGCAGGATACAACGGAAATTATGCTTCTATAC
CAAGATGTACCTTGACCGGAACCACTATGCCAAAGCAAAGGCTCCAGAGTTTTTGCCTTTTTGCATTTATGAAACCAAGT
CGAAGCTTCTCAATGAAAATACCGGCATGGATATAAAATACCAGGAGAACAAGGTGTTTAATCTGCGCCTTGCTGCGGAG
CCCGTCAATGGCCTATTGATCCGCCCTGGCGAAACATTTTCATTTTGGCAGCGGGTGAGATATGCCGAGAAAAATGAGCG
GTATAAGGACGGTCTATGCGTGGTCAATGACGAATTGGTTACGGTTCCGGGAGGCGGTTTGTGTCATCTCAGCAATTTGC
TGTTTTGGCTCTTTCTGCATACTCCCCTCACGATTGTCGAACGGCATGCTCATGAGATTAAAGATTTTCCTTCTCCCGAT
GAGGATGAACCGGATGGTGTGGACGCGACAATCCACGAAGGGTGGTTGGATTTAAAGGTCAAAAACGATACCAATCTTAC
CTTCCAAATTGAACTATCCATTGATGGGCCTTACATCTATGGCCGTATTTTTATGGATCAGGCTAAAGGGTATAGTTACG
AGGTTGTTAATCGTGATAAGCGCTTTCTCCAAAAAGAGGGAAAAATATTTGAGCGGGTTTCCGTTTGCCGGCAGGTGATC
GACAACAAATCCAAGCAAGTTATTTCCGAAAATATGCTTTATACGGATGTATTTGAAATCGGGTATCCGCTTCCGGAAGG
AACTGCTATCGCAGAGGAAAAGGAAATTTGA

Protein sequence :
MKRKRLTQLFPFLLPVRRIQRKLCFYTKMYLDRNHYAKAKAPEFLPFCIYETKSKLLNENTGMDIKYQENKVFNLRLAAE
PVNGLLIRPGETFSFWQRVRYAEKNERYKDGLCVVNDELVTVPGGGLCHLSNLLFWLFLHTPLTIVERHAHEIKDFPSPD
EDEPDGVDATIHEGWLDLKVKNDTNLTFQIELSIDGPYIYGRIFMDQAKGYSYEVVNRDKRFLQKEGKIFERVSVCRQVI
DNKSKQVISENMLYTDVFEIGYPLPEGTAIAEEKEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanWB YP_008394257.1 vancomycin B-type resistance protein VanW Not tested Not named Protein 2e-65 52
vanW NP_815953.1 vancomycin B-type resistance protein VanW Not tested Not named Protein 7e-66 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_1663 YP_002458145.1 van Willebrand factor A DQ212986.1.gene7.p01 Protein 6e-67 54
Dhaf_1663 YP_002458145.1 van Willebrand factor A AE016830.1.gene2252. Protein 3e-66 52
Dhaf_1663 YP_002458145.1 van Willebrand factor A U35369.1.gene4.p01 Protein 3e-66 52
Dhaf_1663 YP_002458145.1 van Willebrand factor A AF310956.2.orf3.gene Protein 1e-65 52
Dhaf_1663 YP_002458145.1 van Willebrand factor A AF253562.2.orf3.gene Protein 2e-46 46