Gene Information

Name : Dhaf_1661 (Dhaf_1661)
Accession : YP_002458143.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Resistance
Product : peptidase M15D vanX D-ala-D-ala dipeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2173
EC number : -
Position : 1776505 - 1777113 bp
Length : 609 bp
Strand : +
Note : PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: fre:Franean1_7136 peptidase M15D VanX D-ala-D-ala dipeptidase

DNA sequence :
ATGAAAAGTGATTTTGTCTTTGTGGACGAGTTGGTATCAGGAATACGTTGGGATGCTAAATACGCCACCTGGGATAATTT
TACCGGCAAACCGGTGGACGGCTATGCAGCCAATCGAATTGTCGGTACGAGAGCGTTGTGCGCGGCCTTGGAAAAAGCAC
GGGAAAACGCCGCATCCTTGGGCTTTGGCTTGCTTCTTTGGGATGGTTACCGCCCTCAATGCGCCGTAGATTGCTTTCTG
CGCTGGTCTAAACAGCCGGAAGATGGCCGGACGAAACAGAAACACTATCCGAATATTGACCGATCCGAGATCATCGAAAA
AGGATATGTGGCTGCCAAGTCGGGCCACAGCCGGGGCAGCGCCATTGATTTAACCCTTTATCATTTAGCTTCCGGAACAC
TTGTGCCCATGGGCGGTGATTTTGATTTGATGGATTCAGTCTCACATCATGGCGCACATGGAATCAGCCAAGCCGAAGCG
AGAAACCGTCAATATCTTTGTTCGATCATGGAGGCCAGCGGTTTTGTTTCCTACGCTTGCGAGTGGTGGCATTACAGCCT
GAAACACGAACCTTATCCCAACACTTACTTTGATTTTCTCATCGCCTAG

Protein sequence :
MKSDFVFVDELVSGIRWDAKYATWDNFTGKPVDGYAANRIVGTRALCAALEKARENAASLGFGLLLWDGYRPQCAVDCFL
RWSKQPEDGRTKQKHYPNIDRSEIIEKGYVAAKSGHSRGSAIDLTLYHLASGTLVPMGGDFDLMDSVSHHGAHGISQAEA
RNRQYLCSIMEASGFVSYACEWWHYSLKHEPYPNTYFDFLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 3e-66 67
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 9e-67 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase U82965.2.orf32.gene. Protein 1e-75 76
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF155139.2.orf6.gene Protein 2e-69 70
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF310956.2.orf6.gene Protein 8e-67 67
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase NC_005054.2598281.p0 Protein 2e-64 67
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase M97297.gene.p01 Protein 2e-64 67
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase NC_014475.1.orf4.gen Protein 2e-64 67
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase AF130997.1.orf5.gene Protein 8e-68 67
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase U35369.1.gene7.p01 Protein 4e-67 66
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase AE016830.1.gene2249. Protein 3e-67 66
Dhaf_1661 YP_002458143.1 peptidase M15D vanX D-ala-D-ala dipeptidase FJ349556.1.orf5.gene Protein 8e-64 65