Gene Information

Name : Dhaf_1533 (Dhaf_1533)
Accession : YP_002458021.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Unknown
Product : RNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : 2.7.7.49
Position : 1635272 - 1637095 bp
Length : 1824 bp
Strand : +
Note : PFAM: intron maturase type II; RNA-directed DNA polymerase (Reverse transcriptase); KEGG: spi:MGAS10750_Spy1709 reverse transcriptase / RNA maturase / endonuclease

DNA sequence :
ATGAGAAGTCCCCAAATTGTATTGGAAAATCTACAGAGGCAATCCCAAAAGCAAGACTACCGGTTTGAGCGTTTGTATCG
GAATCTCTACAACCCAGACTTCTACCTGTTAGCGTATCAGAAGCTGTACGCCAACAATGGAGCCATGACCCCGGGAGTGG
ATAGAACAACGCTGGACGGTACCGGTATGGAGCGCATTGAATCCCTGATTCAATCGCTTAAGAACCGCAGCTACCAGCCA
CAACCAGCGCGCCGGCGCTACATCCCCAAGAAAAGTGGGAAAGGACAACGGCCACTGGGGATTCAGGCGGCAAATGACAA
GCTGGTGCAAGAAGTCGTGCGCATGCTGCTTGAGAGTATCTACGAGCCAACTTTTCTGGACTCTTCCCACGGGTTTCGAC
CGAACAGAAGCTGCCATACGGCGCTCGCCCGGATGCAGCGCAGCTTCAATGGGGTCAAGTGGTTTGTCGAGGGTGACATC
AAAGCCTATTTCGATACTATCGACCACCACATGCTGGTGAACATCCTGCGCAGGCGCATCCAGGACGAGAACTTTATCTC
TCTGATCTGGAAGTTCCTCAGGGCTGGATACCTGGAAGACTGGCAGTACAATGCCACCTACAGCGGGTCTCCGCAGGGGT
CAGGTGCCAGTCCCCTTCTTGCCAATCTGTACCTCCATGAGCTGGATTTGTATATGGAAGAGTATAAACAGCGGTTCGAC
AAAGGCAATCGCCGCCAGGCAGGCAAGGACTACGGACGCGCCCAGCGAACCCACCAGTATCGGAAAGTAAAGTACGACCG
CCTGTGGTTAACCCTGACGGATGAGGAAAAGAAAGCGGCGCAAAGAGAAATCAGAGCCCTGCGCAAGCGGATGCTAGAAT
GCCCCGCCAATGACCCGATGGATGGCACCTACCGCAGAATCCAATACGTGCGCTATTGTGACGACTTTCTCGTGGGAATC
ATCGGCAGCAAGACGGATGCAGAGAAAGTCAAAGCTGACATTTGTCGGTTTCTCTCGGACAAGCTGAAGTTGACCCTCTC
CCCGGAAAAGACTCTGATTACGCACGGACAGGATAAGGCGCGCTTCCTGGGATACGATATCGCGGTATGCCAGGACAACA
CCACCAGAAGGACATCCAGAGGTCAGAGCCGGGTGCACTCCGGAAAGGTCAAGCTGTATGTCCCGAAAGACAAATGGGTT
GGTAAGTTGCGGGAATACGGTGTGCTCAAAGTAGCCTCGGACGGTAACGGCAAGGAAAAATGGACACCGCAGCCAAGAAC
CGACTTCATGGGACTGGAGCCGCGCGAAATCGTCAACATGTATAATGCCCAGCTTCGGGGTATCTACAACTATTTTCGGA
TGGCCAACAACGCCTCGGTACTAAACAAGTTTCATTACGTCATGAAGTACAGCTTGTACAAGACTCTGGCGGGTAAGTTC
AGAACCACGGTTTCAAAGATTAATGCCAAATATAGCCGTGATGGCGCATTTATCGTGGAGTACATGACTAAGTCAGGAAT
CCGGAGGGTCACGTTTTATCAAGATGGATTCCCTCGCATAGTTGCCCCCCTGCCAGCAAATGTGGACTACCAACCGGAAT
ACGTGGTCAACTACGAACCCAAGGAACTGTTCTACCGCATGAAGGCCGCCAGGTGTGAGTTGTGCGGCAAGGAACATGTT
CTGGTCAGCTCCCATCAGGTGAAGCGCCTGAAAGACCTGACCGGCAGCCACCCATGGGAACGGGTCATGCTGAAAATGCG
CCGAAAGACGCTAATTGTGTGCAACGAGTGCCACAGGGCAATACACTCTGTAGATTCTGAGTAA

Protein sequence :
MRSPQIVLENLQRQSQKQDYRFERLYRNLYNPDFYLLAYQKLYANNGAMTPGVDRTTLDGTGMERIESLIQSLKNRSYQP
QPARRRYIPKKSGKGQRPLGIQAANDKLVQEVVRMLLESIYEPTFLDSSHGFRPNRSCHTALARMQRSFNGVKWFVEGDI
KAYFDTIDHHMLVNILRRRIQDENFISLIWKFLRAGYLEDWQYNATYSGSPQGSGASPLLANLYLHELDLYMEEYKQRFD
KGNRRQAGKDYGRAQRTHQYRKVKYDRLWLTLTDEEKKAAQREIRALRKRMLECPANDPMDGTYRRIQYVRYCDDFLVGI
IGSKTDAEKVKADICRFLSDKLKLTLSPEKTLITHGQDKARFLGYDIAVCQDNTTRRTSRGQSRVHSGKVKLYVPKDKWV
GKLREYGVLKVASDGNGKEKWTPQPRTDFMGLEPREIVNMYNAQLRGIYNYFRMANNASVLNKFHYVMKYSLYKTLAGKF
RTTVSKINAKYSRDGAFIVEYMTKSGIRRVTFYQDGFPRIVAPLPANVDYQPEYVVNYEPKELFYRMKAARCELCGKEHV
LVSSHQVKRLKDLTGSHPWERVMLKMRRKTLIVCNECHRAIHSVDSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00689 YP_008394213.1 HNH endonuclease domain protein Not tested Not named Protein 4e-143 48