Gene Information

Name : BCAH820_B0167 (BCAH820_B0167)
Accession : YP_002455049.1
Strain :
Genome accession: NC_011777
Putative virulence/resistance : Virulence
Product : site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 138392 - 139036 bp
Length : 645 bp
Strand : +
Note : identified by match to protein family HMM PF00239

DNA sequence :
GTGGCGAATATTTATGGATATATACGCGTAAGTACAAAAGATCAAAATGAACAACGTCAATTACATAAGATGATGGAACG
TGGGGTGGAGGCTCGGCGCATTTTTGTCGATAAAGCAAGTGGGCGACATTTTGATCGTCCTCAATATCAATTATTACGAA
AAATATTGAGTACAGGTGATATTGTTTACATAGATGCTTTAGATCGTATGGGCCGCAATTATGATGAGGTAATTTCAGAA
TGGAAGTACATAACAAGAGAATTACAAGCTGATATTGTTGTTTTAGAAAATGAAACACTGTTTGATAGTCGTAAATTTCG
AGAGATGGGTGATATGGGTCGATTAATGGAAGATCAGTTTTTATCTTTACTTTCCTATGTTGCAGATCAAGAGCGTAAAA
AAATCCATCAGCGACAAGCAGAAGGGATTGCAGTTGCTAAATCCCAAGGTAAGCATTTAGGGCGTCCTCCATTTACCCTT
TCAGTATTAAGTCAAAAGCAACTAATTATAATTGAAGAAACTTATGAACAGTGGAAAAAAAGAGAGATAACGAGCGTTAT
ATTTATGGAACTATTAGGACTTAAGAAAAATACTTTTTATAAAATACTAAAAGAATATGAAGAGAACAAATTACAACCTA
AATAA

Protein sequence :
MANIYGYIRVSTKDQNEQRQLHKMMERGVEARRIFVDKASGRHFDRPQYQLLRKILSTGDIVYIDALDRMGRNYDEVISE
WKYITRELQADIVVLENETLFDSRKFREMGDMGRLMEDQFLSLLSYVADQERKKIHQRQAEGIAVAKSQGKHLGRPPFTL
SVLSQKQLIIIEETYEQWKKREITSVIFMELLGLKKNTFYKILKEYEENKLQPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 3e-10 41
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-10 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCAH820_B0167 YP_002455049.1 site-specific recombinase VFG1030 Protein 9e-11 41