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Name : BCAH820_B0013 (BCAH820_B0013) Accession : YP_002454900.1 Strain : Genome accession: NC_011777 Putative virulence/resistance : Unknown Product : group II intron reverse transcriptase/maturase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 10013 - 11812 bp Length : 1800 bp Strand : - Note : identified by match to protein family HMM PF00078; match to protein family HMM PF01844 DNA sequence : ATGAGCGCGATAGCAAATCGACATAAACAATACTACGATTTCACAGGAATACAGAATGATTTATTCCAAAGAAGTCGTGA GGGTACTAAGAATTTCAAGAACCTACTAGAGATTGTCATTTCGGATGAAAATATTTTATTAGCATATCGGCAAGTTAAAT CAAACACCGGTTCAAAAACCCCGGGTACTGATGACAAAACAATTTTGGATCTTGCTAATACTAATCAAGATGAGTTCATT CATTATATGAGAGAACTAGTGTTAAACTACAAACCAAAATCGGTTAGACGTGTATGGATAGATAAAAATTACTCAAAAGG GAAAAGACCTTTAGGTATTCCTTGCATACAAGACAGAATCGTCCAACAAATGTTCCTGAACGTTCTGGAACCAATATGCG AAGGGAAATTCTACAATCATTCTTATGGTTTTAGGCCAACACGTACTACACGACATGCGGTTGCAAGAGTTCAAACATTA GTAAATATCAACAAATATCACTACACGGTTGATATTGATATAAAAGGTTTCTTTGATAATGTAAATCACTCCATTCTTCT TAAACAAGTCTGGAATATTGGCATAAGAGACAAACGAGTAATCGCTGTAATTAGCAAAATGCTTAAAGCACCGATTAAAG GAGAAGGTATACCAACAAAAGGCGTACCCCAAGGTGGAATTCTTTCACCACTGCTATCTAACATTGTCCTCAATGACTTA GACCAATGGGTAGCCGATCAATGGGAATGCTTTGAAACGAGGTACCAATACTCCGTCAACTATTCCAAATACGTTAACCT TAGAAGAAATTCTAAACTTAAAGAAGGATTCTTAGTGAGGTACGCAGATGATTTTAGAATCATGACTAACACTCACGATT CAGCGGTTAAATGGTTTCATGCAGTAGTTGATTTTTTAAATAAAAGATTAAAGCTTGAAATCTCACCAAATAAATCAAAA ATTATTAATCTTCGAAAGAAGTCTTCTTCCTTCTTAGGTTATAAATTTAAATCTACTATCAAGGGAAACAAAAGGGTATT CTTCTCGCATATAGATGATGACAAACAAAAACAAATCATCACGAAATTAAAAGAAAGAATCTATGAGATACAAAAGCATC CTTCGGCCGGCAATGCAAATCTTTACAATTCAGTAGTATTAGGAGTCCAAAATAATTTCCAATATGCTACTCACATTGTT AAGGATATGAGCGACATTGAATATAGGGTTTTACGAACTCTTAACAACCGACTGAAAAAAATTGCATGGTATGGCAAGCC CAATGAACTTCCAGAGAAAGGGGCATACCTAAAGTTTTACAAAAATACACGTAAAACATACAGGGTAGCAGGTGTATATC TTTTTCCTATAGGACAGGTTACAACAAAGAATAATCTAAATTATTCACAGTCCATTAACCCCTATACAGATGAAAAAGTA TTCGATTGGGACAAAGAACTTACCGAGCTGATGAAATCCAGACTTCCTAATAGAAGCATCGAATATATGGACAATAGACT ATCCAAATATTCCGCACAAAAAGGGAAATGTTTTATTACTGGATTACCGCTTAAAGCTAGAGATGTTCACTGTCATCATA AGAAACCCACTTTCCTTGGTGGAACAGATGAGTTTCAGAATCTTATCATCGTTCATAAAGATATCCATACATTAATCCAT GCATCACTAGAAGGCACCGTACTAAGGTATGTTAATAGATTCCGATTGCACACAAAACAAATTGAGAAAATCAACCAACT CAGGAAGCTATGTAAACTCGAAAGAATTACTATTAGATAA Protein sequence : MSAIANRHKQYYDFTGIQNDLFQRSREGTKNFKNLLEIVISDENILLAYRQVKSNTGSKTPGTDDKTILDLANTNQDEFI HYMRELVLNYKPKSVRRVWIDKNYSKGKRPLGIPCIQDRIVQQMFLNVLEPICEGKFYNHSYGFRPTRTTRHAVARVQTL VNINKYHYTVDIDIKGFFDNVNHSILLKQVWNIGIRDKRVIAVISKMLKAPIKGEGIPTKGVPQGGILSPLLSNIVLNDL DQWVADQWECFETRYQYSVNYSKYVNLRRNSKLKEGFLVRYADDFRIMTNTHDSAVKWFHAVVDFLNKRLKLEISPNKSK IINLRKKSSSFLGYKFKSTIKGNKRVFFSHIDDDKQKQIITKLKERIYEIQKHPSAGNANLYNSVVLGVQNNFQYATHIV KDMSDIEYRVLRTLNNRLKKIAWYGKPNELPEKGAYLKFYKNTRKTYRVAGVYLFPIGQVTTKNNLNYSQSINPYTDEKV FDWDKELTELMKSRLPNRSIEYMDNRLSKYSAQKGKCFITGLPLKARDVHCHHKKPTFLGGTDEFQNLIIVHKDIHTLIH ASLEGTVLRYVNRFRLHTKQIEKINQLRKLCKLERITIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 8e-103 | 43 |
