Gene Information

Name : sph (BCG9842_B4628)
Accession : YP_002444139.1
Strain : Bacillus cereus G9842
Genome accession: NC_011772
Putative virulence/resistance : Virulence
Product : sphingomyelin phosphodiesterase C
Function : -
COG functional category : R : General function prediction only
COG ID : COG3568
EC number : 3.1.4.12
Position : 668230 - 669231 bp
Length : 1002 bp
Strand : +
Note : identified by match to protein family HMM PF03372; match to protein family HMM TIGR03395

DNA sequence :
GTGAAAGGTAAATTGCTAAAAGGTGTACTTAGCTTAGGTGTTGGTTTAGGAGCTTTATATAGCGGAACGTCAGCTCAAGC
AGAAGCATCTACAAATCAAAATGATACATTAAAAGTGATGACGCATAATGTATATATGCTATCAACAAACTTATATCCAA
ACTGGGGACAAACTGAGCGTGCTGATTTAATTGGGGCGGCAGATTATATAAAGAATCAAGATGTTGTTATATTAAATGAA
GTGTTTGATAATAGCGCATCAGATCGTTTATTAGGTAATTTGAAGAAAGAATATCCAAATCAAACAGCAGTATTAGGTCG
TAGTAGTGGAAGCGAATGGGATAAAACGTTAGGGAACTATTCATCTTCAACTCCTGAAGATGGTGGCGTTGCGATTGTCA
GCAAATGGCCAATCGCTGAAAAGATTCAATATGTATTTGCAAAAGGATGCGGGCCAGATAATTTATCGAATAAAGGATTT
GTATATACGAAAATTAAGAAAAATGATCGTTTCATTCACGTAATTGGGACGCATTTGCAGGCTGAAGATAGTATGTGCGG
AAAAACTTCACCTGCATCTGTACGTACGAACCAATTAAAAGAAATTCAAGATTTTATTAAAAATAAAAATATACCAAATA
ATGAGTATGTGTTAATTGGTGGTGATATGAACGTAAATAAAATAAATGCAGAGAACAAGAATGATTCAGAGTATACATCT
ATGTTTAAAACATTGAACGCTTCTGTACCATCTTATACTGGACATACAGCGACTTGGGATGCAACGACAAACAGTATTGC
AAAATATAATTTCCCTGATAGTCCTGCCGAGTATTTAGATTATATTATTGCAAGCAAAGACCATGCGAACCCATCGTATA
TAGAGAATAAGGTGTTACAGCCGAAATCTCCACAATGGACTGTTACATCATGGTTCCAAAAATATACGTATAATGATTAC
TCTGATCATTATCCAGTAGAGGCGACTATTTCTATGAAGTAG

Protein sequence :
MKGKLLKGVLSLGVGLGALYSGTSAQAEASTNQNDTLKVMTHNVYMLSTNLYPNWGQTERADLIGAADYIKNQDVVILNE
VFDNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQYVFAKGCGPDNLSNKGF
VYTKIKKNDRFIHVIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTS
MFKTLNASVPSYTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTYNDY
SDHYPVEATISMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 3e-71 59
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-71 59
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 4e-71 59
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 2e-77 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sph YP_002444139.1 sphingomyelin phosphodiesterase C VFG1798 Protein 8e-79 59
sph YP_002444139.1 sphingomyelin phosphodiesterase C VFG0674 Protein 1e-77 56