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Name : gabD (BCG9842_B4947) Accession : YP_002443844.1 Strain : Bacillus cereus G9842 Genome accession: NC_011772 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 334666 - 336117 bp Length : 1452 bp Strand : + Note : identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780 DNA sequence : TTGGATAAAAAGGCGACTTTCGTAAGTATAGATAAAAAGGCGATGTATATAAATGGTGAGTGGATTACACTACAAGAACA AATTGAAGTAAATAATCCTGCGACGAAGGAAATATTTGCAACTGTACCAAAAGGCGGAGTAACAGAGGCAAAGCAAGCTG TTGATGCTGCACATGAAGCTTTTAAAACGTGGTCTAAGTTAACGGCAGCAGATCGTGCCACGAAGTTAAAAAAGTGGTTT ACGCTTATTGATGAAAATAAAGAAGAGATCGCAGCGATTATGACGAAGGAACAAGGAAAGCCGTTTGCAGAAGCGCTTGG TGAAGTAAATTATGCAAACAGTTTTGTTGAATGGTATGCAGAAGAGGGGAAACGCGTATACGGTGAAATGATTCCTGCTT CTCATCCGAATAAGCGCATTTTAGTTATGAAGCAACCAGTTGGCGTTATGGCAGCTATTACACCTTGGAACTTCCCAGCT GCTATGATTACGAGAAAGGTAGCCCCAGCGCTTGCAGCAGGCTGTACAGCCGTTGTGAAACCAGCAAGTCAAACGCCATT AACTGCATTGAAATTAGCTGAATTAGCCCATGAAGCAGATATTCCAAAGGGCGTAATCAATATCGTAACAGGTAGTGCAA AAGCAATTGCTGATACATGGATGGAAGATGGTCGCGTTCGAAAAGTGTCCTTTACAGGGTCAACGGAAATCGGGAAAGAG TTAATGGCTAGTGCGGCGCAAACGATGAAAAAAGTTTCGCTTGAGTTAGGGGGACACGCTCCGTTTATCGTAATGAATGA TGCAGATTTAGATAAAGCAGTAGAAGCGGTGATTGGTTCGAAATTCCGTAATGCAGGACAAACGTGTATATGTACAAACC GAGTATTCGTTCAAGAAGAAGTATACGAAGTATTTGTAGAGAAGTTCCAAAAGGCAGTAGGGCAGTTGAAAGTAGGAGAC GGTTTCGGTGACGGAACGACTGTCGGGCCACTTATTGATGAGAATGCAGTTTCAAAAGTACAAGAACATATTGAAGATGC TATTCAAAAAGGTGGAACAGTTTTATATGGTGGTCAAAAGGTCGCAGAGTTAGAGGGACATTTCATTCAACCGACTGTAA TTGGGTTGGCAAATGATACGATGCTTTGTATGAATGAAGAAACATTTGGGCCAGTGGCACCAGTTGCGAAATTTAAAACA GTTGATGAAGTAATTGAACGTGCAAATAATACACCATACGGTTTAGCTGCGTATATTTTCACGAAAGACATTAGCCAAGC ATTCCAAATTAGTGAAGCGCTAGAGTACGGTATTATTGGTCTAAACGATGGTCTTCCATCAGTTGCACAAGCACCATTCG GTGGATTTAAAGAAAGTGGTATCGGCCGTGAAGGAGGCCATTTCGGCATCGAGGAATATTTAGAAATTAAATATATTTCA TTAGGACTATAA Protein sequence : MDKKATFVSIDKKAMYINGEWITLQEQIEVNNPATKEIFATVPKGGVTEAKQAVDAAHEAFKTWSKLTAADRATKLKKWF TLIDENKEEIAAIMTKEQGKPFAEALGEVNYANSFVEWYAEEGKRVYGEMIPASHPNKRILVMKQPVGVMAAITPWNFPA AMITRKVAPALAAGCTAVVKPASQTPLTALKLAELAHEADIPKGVINIVTGSAKAIADTWMEDGRVRKVSFTGSTEIGKE LMASAAQTMKKVSLELGGHAPFIVMNDADLDKAVEAVIGSKFRNAGQTCICTNRVFVQEEVYEVFVEKFQKAVGQLKVGD GFGDGTTVGPLIDENAVSKVQEHIEDAIQKGGTVLYGGQKVAELEGHFIQPTVIGLANDTMLCMNEETFGPVAPVAKFKT VDEVIERANNTPYGLAAYIFTKDISQAFQISEALEYGIIGLNDGLPSVAQAPFGGFKESGIGREGGHFGIEEYLEIKYIS LGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 7e-118 | 53 |
