Gene Information

Name : ribD (PLES_09201)
Accession : YP_002438527.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Unknown
Product : riboflavin-specific deaminase/reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 999736 - 1000857 bp
Length : 1122 bp
Strand : +
Note : -

DNA sequence :
ATGAACGCCGCCGACCCGCTGTACATGGCCCGCGCCCTGGAACTGGCGCGCCAGGGGCTGTACTCCACCCATCCGAATCC
GCGCGTCGGCTGCGTGCTGGTCAAGGACGGCCAGGTGGTCGGCGAGGGCTGGCACGTCCGCGCCGGCGAGCCGCACGCCG
AGGTCCATGCCCTGCGCCAGGCCGGCGAGAATGCACGCGGCGCCACCGCCTACGTAACCCTCGAGCCCTGCAGCCACTTC
GGCCGCACCCCGCCGTGCGCCGATGCGCTGGTGGGCGCCGGGGTGGCGCGGGTGGTCGCGGCGATGCAGGATCCCAACCC
CGAGGTCGCCGGTCGCGGCCTGCTGCGTCTGATGCAGGCCGGCATCGCGGTGCAGAGCGGCGTCCTCGAAGCCGAGGCGC
GGGAACTCAACATCGGTTTCATCAAGCGCATGGAACATGGCCTGCCGTTCGTCCGGGTCAAGCTGGCGATGAGCCTGGAC
GGGCGCACCGCCATGGCCAGCGGGGAAAGCCAGTGGATCACCGGGCCCTCCGCGCGTTCGGCGGTGCAGCGCTTGCGCGC
TCGCTCCAGCGTGGTGTTGTCCGGCGCCGATACGCTGCTGGCGGACGATGCGCGGCTCAACGTACGCCCCGACGAACTGG
GCCTGAACGCCGAGCTTACCGCGCTCGCCGCGGCTCGCCAGCCGTTGCGGGTGCTGGTCGACGGGCGCCTGCGGGTGCCG
CTGGAGTCGGCGTTCTACCAGGCCGGTCCGGCGCTGGTGGCGACCTGCGCCGCCGCCTCGGCGCGCGAACGCTTCCAGGA
CGCCGGCCACGAACTGCTGGCGCTGCCCTCCGCCGAGGGCCACGTCGATTTGCACAAGCTGCTCCTGGAACTGGCGGCGC
GCGGCGCCAACGAAGTGCTGGTGGAGGCCGGCCCGCGTCTGGCCGGCGCCTTCGCCCGGCTGGGGCTGGTGGATGAGTAC
CGGCTGTTCGTCGCGCCGAAGTTCCTCGGCTCCAGCGCCCGTCCTTTGCTCGACTGGCCGCTGGCGCGGATGGCCGATGC
GGCGCAGTTGCGGATCGACGACATCCGCGCGGTGGGCGACGACTGGCTGGTCACCGCGCGGCCCCATCCGCGGGACGCCT
GA

Protein sequence :
MNAADPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGENARGATAYVTLEPCSHF
GRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLD
GRTAMASGESQWITGPSARSAVQRLRARSSVVLSGADTLLADDARLNVRPDELGLNAELTALAAARQPLRVLVDGRLRVP
LESAFYQAGPALVATCAAASARERFQDAGHELLALPSAEGHVDLHKLLLELAARGANEVLVEAGPRLAGAFARLGLVDEY
RLFVAPKFLGSSARPLLDWPLARMADAAQLRIDDIRAVGDDWLVTARPHPRDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-62 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-62 49