Gene Information

Name : PLES_06001 (PLES_06001)
Accession : YP_002438208.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Virulence
Product : putative ATP-binding component of ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 655927 - 657036 bp
Length : 1110 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCGAGACTCAAGGCGGCGATGTGCTGGTCAGCTTCCGTGGCGTGCAGAAAAGCTACGACGGCGAGACCCTCATCGT
GAAGGATCTCAACCTGGACATTCGCAAGGGCGAATTCCTCACCCTGCTCGGCCCCTCCGGGTCCGGCAAGACCACCAGCC
TGATGATGCTGGCCGGTTTCGAAACCCCCACCGCCGGCGAAATCCTCCTGGCCGGTCGCTCGATCAACAATGTCCCTCCG
CACAAGCGCGACATCGGCATGGTGTTCCAGAACTATGCGCTGTTCCCGCACATGACCGTGGCCGAGAACCTGGCCTTTCC
CCTCAGCGTCCGTGGCATGAGCAAGACCGACGTGAAGGAAAGGGTCAAGCGCGCGTTGTCGATGGTCCAGCTCGACGCCT
TCGCCGGGCGTTATCCGGCGCAGCTTTCCGGTGGCCAGCAGCAGCGCGTGGCGCTGGCCCGCGCGCTGGTCTTCGAGCCG
CAACTGGTGCTGATGGACGAGCCCCTGGGAGCGCTGGACAAGCAACTTCGCGAGCACATGCAGATGGAAATCAAGCATCT
GCACCAGCGCCTCGGTGTCACCGTGGTCTACGTCACCCACGACCAGGGCGAGGCGCTGACCATGTCCGACCGGGTGGCGG
TGTTCCACCAGGGCGAAATCCAGCAGATCGAGCCGCCGCGCAATCTCTACGAGCAGCCGCGCAACACCTTCGTGGCCAAC
TTTATCGGCGAGAACAACCGTCTATCCGGGCAGCTTCTCAGTTGCGACGGCGAGCGCTGCGTGGTCGGACTGCCGCGCGG
CGAGAAGGTCGAGGCGCTGGCGGTCAACGTCGGCCAGCCGGGCGAGCCGGTAACCTTGTCGATCCGCCCCGAGCGGGTGC
GCCTGAACGGTGCCAGCGAGTCTTGCGTCAACCGTTTCTCCGGCCGCGTGGCCGAGTTCGTCTACCTGGGCGACCACGTG
CGTGTGCGCCTGGAGGTCTGCGGCCGCGACGACTTCTTCGTCAAGCAGCCGATCGCCGAGCTGGACCCGACGCTGAGCGT
CGGTGATGTGGTTCCGCTGGGCTGGCAGGTCGAGCATGTGAGGGCGCTCGACCCTCTGCCGGCGGCGTGA

Protein sequence : 
MAETQGGDVLVSFRGVQKSYDGETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLAGRSINNVPP
HKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVKERVKRALSMVQLDAFAGRYPAQLSGGQQQRVALARALVFEP
QLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIEPPRNLYEQPRNTFVAN
FIGENNRLSGQLLSCDGERCVVGLPRGEKVEALAVNVGQPGEPVTLSIRPERVRLNGASESCVNRFSGRVAEFVYLGDHV
RVRLEVCGRDDFFVKQPIAELDPTLSVGDVVPLGWQVEHVRALDPLPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PLES_06001 YP_002438208.1 putative ATP-binding component of ABC transporter VFG1206 Protein 6e-41 43