Gene Information

Name : betB (PLES_57681)
Accession : YP_002443346.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 6385130 - 6386602 bp
Length : 1473 bp
Strand : -
Note : catalyzes the formation of betaine from betaine aldehyde

DNA sequence :
ATGGCCCGATTCGAAGAACAGAAGCTCTACATTGGCGGTCGCTACGTGGAGGCCAGCAGTGGCGCCACCTTCGAGACCAT
CAACCCGGCCAACGGCGAAGTGCTCGCCAAGGTCCAGCGGGCTTCCAGGGAAGACGTCGAGCGGGCCGTGCAGAGCGCCG
TCGAGGGGCAGAAGGTGTGGGCGGCGATGACCGCCATGCAGCGCTCGCGCATCCTCCGTCGCGCCGTCGACATCCTCCGC
GAGCGCAACGACGAACTGGCTGCCCTGGAAACCCTGGATACCGGCAAGCCGCTGGCGGAAACCCGCTCGGTGGACATCGT
CACCGGCGCCGACGTGCTCGAGTACTACGCCGGCCTGGTCCCGGCCATCGAAGGCGAGCAGATTCCCCTGCGCGAAACCA
GTTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGGTCGCCGGCATTGGCGCCTGGAACTACCCGGTGCAGATCGCCCTG
TGGAAATCCGCCCCGGCCCTCGCTGCCGGCAACGCGATGATCTTCAAGCCCAGCGAAGTCACCCCGCTGACGGCCCTCAA
GCTGGCCGAGATCTACACCGAGGCCGGCGTGCCGGACGGCGTGTTCAACGTGCTCACCGGCAGCGGACGCGAAGTCGGCC
AGTGGCTGACCGAGCACCCGCTGATCGAGAAGATCTCCTTCACCGGTGGCACCTCCACCGGCAAGAAAGTCATGGCCAGC
GCTTCCAGCTCGTCGCTGAAGGAAGTGACCATGGAGCTGGGCGGCAAGTCCCCGCTGATCATCTTCCCCGACGCAGACCT
CGACCGCGCCGCCGACATCGCCGTCATGGCCAACTTCTTCAGCTCCGGCCAGGTCTGCACCAACGGCACCCGGGTGTTCA
TCCACCGTTCCCAGCAGGCCCGCTTCGAAGCCAAGGTACTGGAGCGCGTGCAGCGCATCCGTCTCGGCGACCCGCAGGAC
GAGAACACCAACTTCGGCCCGCTGGTCAGCTTCCCGCACATGGAAAGCGTGCTCGGCTACATCGAGTCCGGCAAGGCGCA
GAAGGCTCGCCTGCTGTGCGGCGGCGAGCGTGTGACCGATGGAGCGTTCGGCAAAGGCGCCTACGTCGCGCCGACCGTGT
TCACCGATTGCCGCGACGACATGACCATCGTCCGCGAGGAAATCTTCGGCCCGGTGATGAGCATCCTGGTCTATGACGAC
GAAGACGAGGCGATCCGCCGCGCCAACGATACCGAGTACGGCCTCGCCGCCGGCGTCGTGACCCAGGACCTGGCCCGCGC
CCACCGCGCCATCCATCGCCTGGAAGCCGGCATCTGCTGGATCAATACCTGGGGCGAGTCGCCGGCGGAAATGCCGGTCG
GCGGTTACAAGCAATCCGGTGTCGGTCGCGAGAACGGTCTCACCACCCTGGCTCATTACACTCGCATCAAGTCCGTGCAA
GTGGAGCTGGGCGACTACGCCTCGGTGTTCTGA

Protein sequence :
MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILR
ERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIAL
WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS
ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQD
ENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD
EDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQ
VELGDYASVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-76 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-75 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-80 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-77 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-77 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-77 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
betB YP_002443346.1 betaine aldehyde dehydrogenase VFG0082 Protein 1e-75 41