|
Name : thiC (PLES_53591) Accession : YP_002442937.1 Strain : Pseudomonas aeruginosa LESB58 Genome accession: NC_011770 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 5914097 - 5915980 bp Length : 1884 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGCGCAACGCAGAAGAACAACATCACCCGCCTTGAGCAGCTCGACCGCCAGTCGACGCAGCCTTTCCCGAACTCGCG CAAGGTCTACCTGACCGGCTCGCGCCCGGACATCCGCGTCCCGGTGCGGGAAATCTCCCTCGCCGACACCCCCACCGCCT TCGGCGGCGAAAAAAACCCGCCGGTGTTCGTCTACGACACCTCCGGCCCGTATACCGACCCTGAGGTCCGCATCGACCTG CGCAAGGGCCTGCCTGACGTGCGTTCGCGCTGGATCGACGAGCGCGGCGACACCGAGATCCTCCCCGGCCTGACCTCCGA GTTCGGCCAGGCCCGCCTGGCCGACGCCAGCCTCGACGCCCTGCGCTTCGCCCACGTGCGCACGCCGCGCCGGGCCAAGC CGGGCGCCAACGTCTCGCAGATGCACTACGCGAAGAAAGGCATCATCACCCCGGAGATGGAATACATCGCCATCCGCGAG AACATGAAGCTGCAGGAAGCCCGGGCCGCCGGCCTGCTCGACCAGCAGCACCCGGGGCACAGCTTCGGCGCCAATATCCC GAAGGAAATCACCCCCGAGTTCGTCCGCGAGGAAGTCGCCCGCGGCCGCGCGATCATTCCGGCGAACATCAACCACACCG AGCTTGAGCCGATGATCATCGGCCGCAATTTCCTGGTGAAGATCAACGGCAACATCGGCAACAGCGCGCTGGGCTCCTCG ATCGAGGAAGAAGTGGAGAAGCTCACCTGGGGTATCCGCTGGGGCGCCGACACGGTGATGGACCTGTCCACCGGCAAGCA CATCCATGAAACCCGCGAGTGGATCCTGCGCAACAGCCCGGTACCGATCGGCACCGTACCGATCTACCAGGCGCTGGAGA AGGTCAACGGCGTCGCCGAGGACCTGACCTGGGAAATCTTCCGCGACACCCTGATCGAACAGGCCGAGCAGGGCGTCGAC TACTTCACCATCCACGCCGGCGTGCTGCTGCGCTATGTGCCGCTGACCGCCAAGCGGGTCACCGGCATCGTTTCCCGCGG CGGCTCGATCATGGCCAAGTGGTGCCTGGCGCACCACCAGGAGAACTTCCTCTACACGCATTTCGAAGAGATCTGCGAAA TCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGCGATGGCCTGCGTCCGGGCTCGGTGGCCGACGCCAACGACGCCGCC CAGTTCGGCGAGCTGGAAACCCTCGGCGAGCTGACCAAGATCGCCTGGAAGCACGACGTGCAGGTGATGATCGAAGGTCC CGGCCACGTGCCGATGCAATTGATCAAGGAAAACATGGACAAGCAGCTGGAGTGCTGTGACGAGGCGCCGTTCTACACCC TCGGCCCGCTGACCACCGACATCGCCCCCGGCTACGACCACATCACCTCCGGCATCGGCGCGGCGATGATCGGCTGGTTC GGCTGCGCCATGCTCTGCTACGTCACGCCCAAGGAGCACCTGGGTCTGCCGAACAAGGATGATGTGAAGACCGGGATCAT CACCTACAAGATCGCCGCCCATGCCGCCGACCTCGCCAAGGGCCACCCGGGCGCGCAGATCCGCGACAACGCGCTATCCA AGGCGCGCTTCGAGTTCCGTTGGGAGGACCAGTTCAACCTTGGCCTGGACCCGGACACCGCGCGGGCGTTCCATGACGAG ACCCTGCCGAAGGACTCGGCCAAGGTCGCGCACTTCTGCTCCATGTGCGGACCGAAGTTCTGCTCGATGAAGATCACCCA GGAAGTCCGCGACTACGCCAAGGAGAACGGCCTGTCCGACGAGAGCAAGGCCATCGAGGCCGGCTTCCAGGAGCAGGCGG CGCGCTTCAAGGACGAAGGATCGGTGATCTACAGGCAGGTCTAG Protein sequence : MSATQKNNITRLEQLDRQSTQPFPNSRKVYLTGSRPDIRVPVREISLADTPTAFGGEKNPPVFVYDTSGPYTDPEVRIDL RKGLPDVRSRWIDERGDTEILPGLTSEFGQARLADASLDALRFAHVRTPRRAKPGANVSQMHYAKKGIITPEMEYIAIRE NMKLQEARAAGLLDQQHPGHSFGANIPKEITPEFVREEVARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSS IEEEVEKLTWGIRWGADTVMDLSTGKHIHETREWILRNSPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTLIEQAEQGVD YFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHQENFLYTHFEEICEIMKAYDVSFSLGDGLRPGSVADANDAA QFGELETLGELTKIAWKHDVQVMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWF GCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHDE TLPKDSAKVAHFCSMCGPKFCSMKITQEVRDYAKENGLSDESKAIEAGFQEQAARFKDEGSVIYRQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 78 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 78 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
