Gene Information

Name : dnaB (PLES_53171)
Accession : YP_002442895.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 5866497 - 5867891 bp
Length : 1395 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGAACGAGATCACCAGCCCCGAGCAATACGACCTGGAAACCACAGCCCTGAAGGTGCCGCCGCACTCGATCGAGGCCGA
GCAGGCCGTGCTGGGTGGCCTGATGCTGGACAACAACGCCTGGGAGCGTGTGTCGGATTCGGTGTCCGACGGCGATTTCT
ACCGCCATGACCATCGCCTGATCTTCCGCGCCATCTACAAGCTGGCCGAGGCCAACCAGCCGATCGACGTGGTGACCCTC
TCCGAGCAGTTGGAGAAGGAAGGACAACTGGCCCAGGTCGGCGGCCTGGCCTATCTCGGCGAACTGGCGAAGAACATTCC
CTCGGTCGCCAACATCAAGGCCTACGCGCAGATCATCCGCGAGCGCGCCACCCTGCGCCAACTGATCGGCATCAGCAACG
AGATCGCCGACAGCGCCTTCCACCCGGAAGGGCGCGGCGCCAACGAGATCCTCGACGAGGCCGAGCGGAAGATCTTCGAG
ATCGCCGAAGCGCGACCGAAGACCGGCGGGCCGGTAGGGATCAGCGATATCCTGGTCAAGACCATCGACCGCATCGACTA
CCTGTTCAACACCACCGAGGCGCTGACCGGGGTGTCCACCGGTTTCACCGACCTCGACGAGAAGACCAGCGGCCTGCAGC
CGGCCGACCTGATCATCGTCGCCGGGCGTCCGTCGATGGGTAAGACCACCTTCGCCATGAACCTGGTCGAGAACGCGGTG
ATGCGCACCGACAAGGCCGTGTTGGTGTACTCCCTGGAGATGCCCTCCGACTCGATCGTGATGCGTATGCTCTCGTCGCT
CGGGCGTATCGACCAGACCAAGGTGCGTTCCGGCAAGCTCGACGACGAGGACTGGCCGCGCCTGACTTCGGCGATCAACC
TGCTCAACGACAAGAAGCTGTTCATCGACGATACCGCTGGCATCAGTCCCTCGGAAATGCGCGCGCGGACCCGTCGCCTG
GTGCGCGAGCACGGCGACCTGGCGCTGATCATGATCGACTACCTGCAACTGATGCAGATACCCGGCTCCAGCGGCGACAA
CCGGACCAACGAGATTTCCGAGATTTCCCGCTCGCTGAAGGCCCTGGCGAAGGAATTCAACTGCCCGGTGATTGCCCTGT
CGCAGCTCAACCGCTCCCTGGAGCAGCGACCCAACAAGCGCCCGGTGAACTCCGACTTGCGCGAATCCGGGGCGATCGAG
CAGGACGCCGACGTGATCATGTTCGTCTACCGCGACGAGGTGTACCACCCGGAGACCGAGTTCAAGGGCGTCGCCGAAAT
CATCATCGGCAAGCAGCGTAACGGTCCGATCGGTACGGTGCGCCTGGCCTTCATCGGCAAATACACGCGCTTCGAGAACC
TTGCCGCCGGCATGTACAACTTCGAGGACGAATGA

Protein sequence :
MNEITSPEQYDLETTALKVPPHSIEAEQAVLGGLMLDNNAWERVSDSVSDGDFYRHDHRLIFRAIYKLAEANQPIDVVTL
SEQLEKEGQLAQVGGLAYLGELAKNIPSVANIKAYAQIIRERATLRQLIGISNEIADSAFHPEGRGANEILDEAERKIFE
IAEARPKTGGPVGISDILVKTIDRIDYLFNTTEALTGVSTGFTDLDEKTSGLQPADLIIVAGRPSMGKTTFAMNLVENAV
MRTDKAVLVYSLEMPSDSIVMRMLSSLGRIDQTKVRSGKLDDEDWPRLTSAINLLNDKKLFIDDTAGISPSEMRARTRRL
VREHGDLALIMIDYLQLMQIPGSSGDNRTNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIE
QDADVIMFVYRDEVYHPETEFKGVAEIIIGKQRNGPIGTVRLAFIGKYTRFENLAAGMYNFEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 6e-122 58
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-106 55
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-106 52
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 8e-106 51
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 8e-106 51
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-98 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-95 47
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-95 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 8e-83 44