Gene Information

Name : PLES_50611 (PLES_50611)
Accession : YP_002442641.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Virulence
Product : putative TonB-dependent receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 5578322 - 5580550 bp
Length : 2229 bp
Strand : +
Note : -

DNA sequence :
ATGCCCCGCTCCATCCCTTTGCGCCCGGCTCCCCTGGCGCTTTCCCTGTCCCTCTTCGCTTCGTTTTCCGCTCCTGCGCT
GGCTGCCGATCCGGTGGAGCAGCAGATGGTGGTGATCGGCTCGCGCGCGCCGACCAGCATCAGCGAGTTGCCCGGCACGG
TCTGGGTGATCGAGCGCGAGCAACTGGACCAGCAGACCCAGGCCGGCGTGCCGCTGAAGGAGGCGTTGGGACAATTGATC
CCGGGCCTGGATATCGGCTCCCAGGGTCGTACCAACAACGGCCAGAACCTGCGCGGACGCAGCGTACTGGTGATGATCGA
CGGGGTGTCGCTGAACAGTTCACGGGGCATCAGCCGGCAGTTCGACTCCATCGACCCATTCAACATCGAGCGCATCGAGG
TGATGTCCGGCGCCAGCGCGGTATACGGCGGCGGCGCCACCGGCGGGATCATCAACATCGTGACCAAGAAGGGCGTCGGC
GGCGACACTCGCTTCAACACCGAGCTGGGCGCCCGCAGCGGCTTCCAGAGCCATGAGGACCACGACCTGCGCGCGGCGCA
GTCGATCAGCGGCGGCAACGACCTGTTCAACGGCCGCCTGGCCATCGCCTACCAGAAGAACGGCGCGGCCTACGACGGCA
GTGGCGACCAGGTACTGACGGACATCACCCAGACCGACCTGCAGTACAACAGGTCGGTGGACCTGATGGGCAGCCTTGGC
TTCACTTTCGCCAATGGCCACAGCCTCGATCTCGGCCTGCAGTACTACGACTCCGGCTACGACGGCGACCGCGGCCTCGA
TCTTGGGCGCAACTTCGATGCCCTGCGCGGACGGGCACCCTATTCGATCAAGGGCGGCGTCGACCTCGACCGCGAACCGG
AGAGCAAGCGCCATCAGTTCAACGCCACCTACCACGCGCCGGAAGTGCTGGGTCACGACCTCTACCTGCAGGCCTACTAC
CGCAACGAGAAGATGGCCTTCAATCCCTTCCCTACCATCCGCTACAGCAATACCGGCGCGATCAACTACGGCACCTCCTA
CTACTCGGCCTCGCAGCAGGACACCGACTACTACGGGATGAAACTGGCCCTGGTGAAGACCTGGGAGCGCGCCAGCCTGA
CCTACGGGGTGGACCTGGACCGGGAAAAATTCACGTCCGACCAGATGCTCTTCAACCTGCCGCTCGCCGCCGCCAGCGGC
GGGCTGGTAGCCAGTGAACAGGCCAAGCTGGGCCGCTACCCGGACATCGATACCGACAGCCGCGCCTTCTTCCTCCAGGG
CAGTTGGAAGGCCACCGACGACCTGACCCTGAGCGCCGGCGTGCGGCGCCAGTCGATGAGCACCGACGTCAGCGACTTCG
TTGCGGCGAACCAGCAGATCCTCATCGCCAACGGCCTCGGCAAGACCGCCGACGCGGTTCCGGGCGGGAGCAAGGACTAC
GACGTCAACCTGGTCAACGTCGGCGCCATCTACAAGCTGAACCTGCAACAACAGGTCTGGGCCAACTACAGCGAAGGCTT
CGAGCTGCCGGATCCGGCCAAGTACTACGGTTTCGGACGCTACGGCGCAGCCGACGGCAATGGCCACTACCCGCTGTTGC
AGGGGGTCAGCGTGAACGACTCGCCGCTGGACGGGATCAAGACCAAGCAGGTCGAGCTGGGCTGGCGGCACACCGACGGT
GCCCTGGATACCCAGGTGGCGGCGTTCTATTCCTGGTCGGACAAGAGCATCAAGTACGACTCGAAGACCCTGGCGGTGCT
GCAGCAGGACACCAAGAAGCGCAACTACGGCCTGGAGGGCCAGGCTACCTACTGGCTGGACGATCACTGGCAGGTCGGCG
TCAACGGCCTGGCCATCCGCTCCCAGGAGAAGGTCGACGGCCGCTGGCTGAAGCAGGACGTGACCTCGGCCAGCCCGTCC
AAGGCCGGCGCCTTCGTCGGCTGGAAGGACGACCAGCGCAGCCTGCGCCTGCAGGGCGTGCGCACCTTCAACCTGAACGA
CGAGCCGGGCAACAAGATCGACGGCTACGCGCTGTTCGACCTGCTCGGCACCCAGGCACTGCCGGTGGGCACCCTCACCG
CGGGCATCCAGAACCTGCTGGACAAGGACTACACCACGGTCTGGGGACAACGCGCGCAGGTCTACTACGGCGGGCTCGCA
CCAGCGGGACTGTTCGACTACAAGGGACGGGGGCGGACCTACAGCCTGACGTATAGCGTGGAGTTCTGA

Protein sequence :
MPRSIPLRPAPLALSLSLFASFSAPALAADPVEQQMVVIGSRAPTSISELPGTVWVIEREQLDQQTQAGVPLKEALGQLI
PGLDIGSQGRTNNGQNLRGRSVLVMIDGVSLNSSRGISRQFDSIDPFNIERIEVMSGASAVYGGGATGGIINIVTKKGVG
GDTRFNTELGARSGFQSHEDHDLRAAQSISGGNDLFNGRLAIAYQKNGAAYDGSGDQVLTDITQTDLQYNRSVDLMGSLG
FTFANGHSLDLGLQYYDSGYDGDRGLDLGRNFDALRGRAPYSIKGGVDLDREPESKRHQFNATYHAPEVLGHDLYLQAYY
RNEKMAFNPFPTIRYSNTGAINYGTSYYSASQQDTDYYGMKLALVKTWERASLTYGVDLDREKFTSDQMLFNLPLAAASG
GLVASEQAKLGRYPDIDTDSRAFFLQGSWKATDDLTLSAGVRRQSMSTDVSDFVAANQQILIANGLGKTADAVPGGSKDY
DVNLVNVGAIYKLNLQQQVWANYSEGFELPDPAKYYGFGRYGAADGNGHYPLLQGVSVNDSPLDGIKTKQVELGWRHTDG
ALDTQVAAFYSWSDKSIKYDSKTLAVLQQDTKKRNYGLEGQATYWLDDHWQVGVNGLAIRSQEKVDGRWLKQDVTSASPS
KAGAFVGWKDDQRSLRLQGVRTFNLNDEPGNKIDGYALFDLLGTQALPVGTLTAGIQNLLDKDYTTVWGQRAQVYYGGLA
PAGLFDYKGRGRTYSLTYSVEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 1e-144 49
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 1e-144 49
iutA AAK71635.1 IutA Virulence SHI-3 Protein 4e-144 49
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 2e-144 49
iutA AAD44750.1 IutA Virulence SHI-2 Protein 6e-143 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PLES_50611 YP_002442641.1 putative TonB-dependent receptor VFG0619 Protein 6e-145 49
PLES_50611 YP_002442641.1 putative TonB-dependent receptor VFG1085 Protein 2e-144 49
PLES_50611 YP_002442641.1 putative TonB-dependent receptor VFG0936 Protein 8e-145 49