Gene Information

Name : PLES_46481 (PLES_46481)
Accession : YP_002442229.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Virulence
Product : HxcT pseudopilin
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 5116377 - 5116826 bp
Length : 450 bp
Strand : -
Note : -

DNA sequence : 
ATGGATGTCGTGCAGTTCAGCTCCAGCCCGAAAGGACATCGGGGACAGCGGGGCTTCACCCTGATCGAGATCATGGTGGT
GGTGGTGATCCTCGGCATCCTCGCCGCGATGGTGGTGCCCAAGGTGCTCGACCGTCCCGACCAGGCCCGCGCCACCGCGG
CGCGCCAGGACATCTCCGGGCTGATGCAGGCGCTCAAGCTCTACCGCCTCGACCAGGGCCGCTATCCGAGCCAGGCGCAG
GGCTTGAAGGTGCTCGCGGAGCGCCCTGCCGATGCCTCGGCGAGCAACTGGCGCTCGTACCTGGAGCGCCTGCCCAACGA
CCCCTGGGGCAAGCCCTACCAGTACCTGAATCCCGGCGTGAACGGTGAGATCGACGTGTTCTCCCTCGGCGCCGACGGGC
AGCCGGGCGGCGAGGGCATCAACGCCGACATCGGCTCCTGGCAGCTCTGA

Protein sequence : 
MDVVQFSSSPKGHRGQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKLYRLDQGRYPSQAQ
GLKVLAERPADASASNWRSYLERLPNDPWGKPYQYLNPGVNGEIDVFSLGADGQPGGEGINADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-34 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-34 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PLES_46481 YP_002442229.1 HxcT pseudopilin VFG1871 Protein 2e-40 59
PLES_46481 YP_002442229.1 HxcT pseudopilin VFG0180 Protein 1e-36 57
PLES_46481 YP_002442229.1 HxcT pseudopilin VFG2050 Protein 8e-35 52