Gene Information

Name : cat (PLES_46241)
Accession : YP_002442205.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 5075462 - 5076082 bp
Length : 621 bp
Strand : +
Note : -

DNA sequence :
ATGGGCAACTATTTCGAGAGCCCCTTCAGGGGCAAGCTGCTCTCGGAACAGGTCAGCAACCCGAACATACGGGTGGGGCG
CTACAGCTACTACTCCGGCTACTATCACGGGCATTCCTTCGACGACTGCGCCCGCTACCTGATGCCGGACCGCGACGACG
TGGACAAGCTGGTCATCGGCAGTGGCGCCGCCTTCATCATGGCCGGCAACCAGGGACACCGCGCCGAATGGGCGTCGACC
TTCCCCTTCCACTTCATGCACGAAGAGCCTGCCTTCGCCGGCGCCGTGAACGGCTATCAGCCAGCGGGCGACACGCTGAT
CGGCCATGACGTCTGGATCGGTACCGAGGCGATGTTCATGCCAGGCGTACGGGTCGGCCACGGAGCCATCATCGGCAGCC
GCGCGCTGGTGACCGGCGATGTCGAGCCCTATGCCATCGTCGGCGGTAACCCGGCCCGGACCATTCGTAAGCGCTTTTCC
GATGGCGATATCCAGAACCTGCTGGAAATGGCCTGGTGGGACTGGCCACTGGCCGATATCGAGGCAGCCATGCCAATGCT
GTGTACTGGGGATATCCCCGCCTTGTACCGGCACTGGAAACAGCGCCAGGCCACGGCCTGA

Protein sequence :
MGNYFESPFRGKLLSEQVSNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSGAAFIMAGNQGHRAEWAST
FPFHFMHEEPAFAGAVNGYQPAGDTLIGHDVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPARTIRKRFS
DGDIQNLLEMAWWDWPLADIEAAMPMLCTGDIPALYRHWKQRQATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 4e-66 71
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 4e-66 71
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 6e-65 69

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_002442205.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 4e-85 97
cat YP_002442205.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 2e-66 71
cat YP_002442205.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 2e-66 71
cat YP_002442205.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 2e-65 69
cat YP_002442205.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 8e-56 62
cat YP_002442205.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 6e-32 43
cat YP_002442205.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 2e-25 42