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Name : pcrD (PLES_36241) Accession : YP_002441209.1 Strain : Pseudomonas aeruginosa LESB58 Genome accession: NC_011770 Putative virulence/resistance : Virulence Product : type III secretory apparatus protein PcrD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 4016693 - 4018813 bp Length : 2121 bp Strand : - Note : - DNA sequence : ATGAACGACCTGAGCGGGCTTCTCGGCCGGGTCGGCGAGCGCAAGGACATCCTGCTGGTGGTGTTGCTGCTGGCGGTGGT GTTCATGATGGTGCTGCCGCTGCCACCGCTGCTGCTGGACATCCTCATCGCCGTCAACATCACCATCTCCGTGGTCCTGC TGATGATGTCGGTGTACATCGGCTCGCCGTTGCAGTTCTCGGTGTTCCCGGCGGTGCTGCTGATCACCACGCTGTTCCGC CTGGCGCTGTCGGTGAGCACCACGCGGATGATCCTGCTGCAGGCCGACGCGGGGCAGATCGTCAACACCTTCGGCAGCTT CGTGGTCGGCGGCAACCTGGTGGTGGGCATCATCATCTTCCTGATCATCACCATCGTGCAGTTCCTGGTGATCACCAAGG GTGCCGAGCGGGTCGCCGAGGTCAGCGCGCGCTTTTCCCTGGATGCCATGCCAGGCAAGCAGATGAGCATCGACGGCGAC ATGCGTGCCGGCGTGATCGATGTCAACGAGGCGCGGGCGCGGCGCGCGGTGATCGAAAAGGAAAGCCAGATGTTCGGCTC CATGGACGGCGCGATGAAGTTCGTCAAGGGCGACGCCATCGCCGGGCTGATCATCATCGTCGTCAACATCCTCGGCGGCA TCGCCATCGGCGTCACGCAGAAGGGCCTGAGCACCGCCGACGCGCTGCAACTGTACGCGGTGCTGACCGTCGGCGATGGC ATGGTCTCGCAGGTGCCGGCGTTGCTGATCGCCATCACCGCCGGGATCATCGTCACCCGGGTGTCTTCCGACGAATCGGC GGACCTCGGCAGCGACATCGGCGAACAGGTGGTGGCGCAGCCCAAGGCGCTGCTGATCGGCGGCCTGTTGCTGGTGCTGT TCGGCCTGATTCCCGGTTTCCCGACCCTGACCTTCCTGGCTCTCGCGCTGCTGGTCGGCGGCGGCGGCTACTTCATGCTC TGGCGCCAGCGGCTCCAGGCCAGCGCCGGTTCCCGCGACCTGCCGGCGCTGCTCGCGCAGGGCGCCGGAGCGCCATCGGC CAAGGCGCGCGGCAAGGCTGGCGGCGGCAAGCCGAAGGCCGGGCGTCTCGCCGAGCAGGAAGAATTCGCCCTCACCGTGC CGTTGCTGATCGACGTCGATGCCAGCCTCCAGGAACGTCTGGAGGCGATGTCGCTGAACGAGGAACTGGTGCGGGTACGA CGCGCGCTGTACCTGGATTTCGGCGTGCCGTTCCCGGGTATCCACTTGCGCTTCAACGAAGCGATGGGCGATGGCGAATA CCTGGTGCAGCTACAGGAGGTCCCGGTCGCGCGCGGATGCCTGCGGCCGGGCTGGTTGCTGGTGCGCGAACGCGCCGCGC AGCTGGAACTGCTCGCGGTCCCCCACGAGCCGGCGGAGCTGCAGGTGCCGGGAGAGGAAGCGAGCTGGGTGGAGCAGGCG CATCAGGATCGCCTGGAGCGTTCCGGCTGTGCCTGCCTGGGCCTGGAGCAGGTGCTCACCTGGCACCTGTCCCATGTGCT GCGGGAGTACGCCGAGGATTTCATCGGCATCCAGGAGACGCGCTACCTGCTGGAGCAGATGGAGCAGGGTTACGGCGAGC TGGTGAAGGAGGCACAGCGGATCGTTCCCCTGCAGCGGATGACCGAGATTCTCCAGCGCCTGGTCGGCGAGGACATCTCG ATCCGCAACATGCGGGCGATCCTCGAGGCGATGGTGGAGTGGGGGCAGAAGGAGAAGGACGTGGTGCAGCTCACCGAGTA CATCCGCAGCAGCCTCAAGCGCTACATCTGCTACAAGTACTCCAGCGGCAACAATATCCTTCCCGCCTATCTGCTGGACC AGGCGGTGGAGGAGCAGATCCGCGGTGGCATCCGCCAGACCAGCGCCGGCAGCTACCTGGCCCTCGACCCGGCGATAACC CAGGCCTTCCTCGAGCGCGTGCGGCAGACCGTCGGCGATCTCGCGCAGATGCAGAACCGGCCGGTGCTGATCGTTTCCAT GGATATCCGCCGCTACGTGCGCAAGCTGGTGGAGAGCGACTATGCCGGGCTGCCGGTGCTGTCCTACCAGGAGCTGACCC AGCAGATCAACATCCAGCCGCTTGGCAGGATCGTGTTGTGA Protein sequence : MNDLSGLLGRVGERKDILLVVLLLAVVFMMVLPLPPLLLDILIAVNITISVVLLMMSVYIGSPLQFSVFPAVLLITTLFR LALSVSTTRMILLQADAGQIVNTFGSFVVGGNLVVGIIIFLIITIVQFLVITKGAERVAEVSARFSLDAMPGKQMSIDGD MRAGVIDVNEARARRAVIEKESQMFGSMDGAMKFVKGDAIAGLIIIVVNILGGIAIGVTQKGLSTADALQLYAVLTVGDG MVSQVPALLIAITAGIIVTRVSSDESADLGSDIGEQVVAQPKALLIGGLLLVLFGLIPGFPTLTFLALALLVGGGGYFML WRQRLQASAGSRDLPALLAQGAGAPSAKARGKAGGGKPKAGRLAEQEEFALTVPLLIDVDASLQERLEAMSLNEELVRVR RALYLDFGVPFPGIHLRFNEAMGDGEYLVQLQEVPVARGCLRPGWLLVRERAAQLELLAVPHEPAELQVPGEEASWVEQA HQDRLERSGCACLGLEQVLTWHLSHVLREYAEDFIGIQETRYLLEQMEQGYGELVKEAQRIVPLQRMTEILQRLVGEDIS IRNMRAILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYSSGNNILPAYLLDQAVEEQIRGGIRQTSAGSYLALDPAIT QAFLERVRQTVGDLAQMQNRPVLIVSMDIRRYVRKLVESDYAGLPVLSYQELTQQINIQPLGRIVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 0.0 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pcrD | YP_002441209.1 | type III secretory apparatus protein PcrD | VFG0198 | Protein | 0.0 | 99 |
