|
Name : popD (PLES_36191) Accession : YP_002441204.1 Strain : Pseudomonas aeruginosa LESB58 Genome accession: NC_011770 Putative virulence/resistance : Virulence Product : Translocator outer membrane protein PopD precursor Function : - COG functional category : - COG ID : - EC number : - Position : 4012477 - 4013364 bp Length : 888 bp Strand : - Note : - DNA sequence : ATGATCGACACGCAATATTCCCTGGCGGCTACCCAGGCCGCGATCCCCTCCGAGCCGATCGCTCCCGGCGCCGCCGGGCG TTCCGTCGGCACGCCGCAAGCGGCTGCGGACCTGCCGCAGGTGCCGGCCGCGCGGGCCGATCGGGTCGAACTGAACGCTC CGCGCCAGGTGCTCGACCCGGTGCGCATGGAAGCGGCCGGCAGCGAGCTGGACAGCAGCGTCGAGCTTCTGCTGATTCTC TTCCGCATCGCGCAGAAAGCGCGCGAGCTGGGCGTGCTCCAGCGCGACAACGAGAACCAGTCGATCATCCACGCGCAGAA GGCGCAGGTGGACGAGATGCGCAGCGGCGCCACGCTGATGATCGCCATGGCGGTGATCGCTGGCGTCGGCGCATTGGCCT CGGCGGTGGTCGGCAGCCTCGGCGCGTTGAAGAACGGCAAGGCCATCAGTCAAGAGAAGACCCTGCAGAAGAACATCGAT GGGCGCAACGAACTGATCGACGCGAAGATGCAGGCGCTTGGCAAGACCTCCGACGAGGATCGCAAGATCGTCGGCAAGGT CTGGGCGGCGGACCAGGTGCAGGACAGTGTGGCGTTGCGTGCGGCGGGCCGTGCCTTCGAGAGCCGCAACGGCGCCCTGC AGGTGGCCAACACGGTGATCCAGTCCTTCGTCCAGATGGCCAACGCCTCGGTCCAGGTGCGCCAGGGCGAATCGCAGGCG AGCGCCCGGGAAGGAGAGGTCAACGCCACCATCGGGCAGAGCCAGAAGCAGAAGGTCGAGGACCAGATGAGCTTCGATGC CGGCTTCATGAAGGACGTCCTGCAGCTCATCCAGCAGTACACCCAGAGCCATAACCAGGCCTGGCGTGCGGCGGCCGGAG TGGTCTGA Protein sequence : MIDTQYSLAATQAAIPSEPIAPGAAGRSVGTPQAAADLPQVPAARADRVELNAPRQVLDPVRMEAAGSELDSSVELLLIL FRIAQKARELGVLQRDNENQSIIHAQKAQVDEMRSGATLMIAMAVIAGVGALASAVVGSLGALKNGKAISQEKTLQKNID GRNELIDAKMQALGKTSDEDRKIVGKVWAADQVQDSVALRAAGRAFESRNGALQVANTVIQSFVQMANASVQVRQGESQA SAREGEVNATIGQSQKQKVEDQMSFDAGFMKDVLQLIQQYTQSHNQAWRAAAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lopD | AAO18056.1 | LopD | Virulence | TTSS locus | Protein | 9e-57 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| popD | YP_002441204.1 | Translocator outer membrane protein PopD precursor | VFG0204 | Protein | 4e-123 | 100 |
