Gene Information

Name : PLES_35201 (PLES_35201)
Accession : YP_002441106.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Unknown
Product : putative ATP-binding component of ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 3904426 - 3906036 bp
Length : 1611 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGAGAACATTCTGGAAATCCGCGACCTCGCCGTCGAATTCCTCTCCGGCGAGCAACGCCAGCGGGTGGTCGAAGG
CGTCAGCTTCGACATCCGCCAGGGCGAGACCCTGGCCCTGGTCGGCGAAAGCGGCTCGGGCAAGTCGGTGACCGCCCACT
CCATCCTGCGCCTGCTGCCCTACTCCGTCGCCAGCCACCCAGCAGGCAGCATCCACTACCAGGGCGAGGATCTGCTCAAG
CTCCCGGAACGGCGCCTGCGCGGGATCCGCGGCAACCGCATCGCCATGGTCTTCCAGGAACCCATGACCTCGCTCAATCC
GCTGCATACCATCGAGAAGCAGCTCGCCGAGGTCCTCGCCCTGCACAAGGGCCTGGGTGGCGCCAAGGCCAGCGCGAAAA
TTCTCGAACTGCTCGAGCTGGTCGGCATCCCCGAACCGGCCAAGCGCCTGAAAGCCTATCCACACGAACTCTCCGGCGGC
CAGCGGCAGCGGGTGATGATCGCCATGGCCCTGGCCTGCGAGCCGCAACTGCTGATCGCCGACGAACCGACCACCGCGCT
CGACGTCACCGTCCAGTTGAAGATCCTCGATCTGCTCAAGGACCTGCAGGCACGCCTGGGCATGTCCCTGCTGCTGATCA
CCCACGACCTCAACCTGGTGCGGCGCATCGCCCACCGCGTCTGCGTCATGCAACAAGGGCGGATCGTCGAGCAGGCTTCC
TGCCAGGAACTCTTCGCAGCCCCGCGACACCCCTATACCCGCGAGCTGCTCAACGCCGAGCCCAGCGGTGCGCCGGCAAG
CAACCCGCCCGGTGAAACCCTGTTGGCGGTGGACGACCTGCGGGTCTGGTTCCCGATCCGCAAAGGCGTGTTCCGCCGCA
CCGTGGACCACGTCAAGGCGGTCGACGGGGTCAATTTCGAACTACCCCGCGGGCAGACGCTGGGCATCGTTGGCGAAAGC
GGCTCGGGCAAGTCGACCCTTGGCCTGGCGATCCTGCGGCTGCTGGAAAGCCAGGGCGGCATCCGCTTCGAAGGCACCCG
GCTGGACGGTCTCGCGCAACATGACGTGCGCCCGCTACGCCGCGAGATGCAGGTGGTGTTCCAGGACCCGTATGGCAGCC
TCAGCCCACGCATGTGTGTCGGCGAGATCGTCGGCGAAGGCCTGCGCATCCATAGGATCGGCAGCGAGGCCGAACAGGAG
CAGGCGATCATCGACGCGCTGGTGGAGGTCGGGCTCGATCCGCAGACCCGCTACCGTTACCCCCACGAATTCTCCGGCGG
CCAGCGCCAGCGCATCGCCATCGCCCGGGCACTGGTGCTGAAACCGGCACTGATCCTGCTCGACGAACCGACCTCGGCGC
TCGACCGCACCGTGCAGCGCCAGGTCGTGGAATTGCTGCGGCAACTGCAGGGCAAGTACAACCTCACCTACCTGTTCATC
AGCCACGACCTGGCGGTGGTCAAGGCGCTCAGCCACCAGCTGATGGTGGTTCGACATGGCAAGGTAGTGGAACAGGGCAG
CGCCGAAGCGGTTTTCGCCTCGCCGCAACATCCCTATACGCAGCAATTGCTGGAGGCTGCCTTCATGGCCCCGGCAAGCG
CGGAAAACTGA

Protein sequence :
MSENILEIRDLAVEFLSGEQRQRVVEGVSFDIRQGETLALVGESGSGKSVTAHSILRLLPYSVASHPAGSIHYQGEDLLK
LPERRLRGIRGNRIAMVFQEPMTSLNPLHTIEKQLAEVLALHKGLGGAKASAKILELLELVGIPEPAKRLKAYPHELSGG
QRQRVMIAMALACEPQLLIADEPTTALDVTVQLKILDLLKDLQARLGMSLLLITHDLNLVRRIAHRVCVMQQGRIVEQAS
CQELFAAPRHPYTRELLNAEPSGAPASNPPGETLLAVDDLRVWFPIRKGVFRRTVDHVKAVDGVNFELPRGQTLGIVGES
GSGKSTLGLAILRLLESQGGIRFEGTRLDGLAQHDVRPLRREMQVVFQDPYGSLSPRMCVGEIVGEGLRIHRIGSEAEQE
QAIIDALVEVGLDPQTRYRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRQLQGKYNLTYLFI
SHDLAVVKALSHQLMVVRHGKVVEQGSAEAVFASPQHPYTQQLLEAAFMAPASAEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-76 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-76 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-76 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-76 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 8e-93 43