Gene Information

Name : PLES_35091 (PLES_35091)
Accession : YP_002441095.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Virulence
Product : putative Orn/Arg/Lys decarboxylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : -
Position : 3891006 - 3893261 bp
Length : 2256 bp
Strand : -
Note : -

DNA sequence :
ATGTATAAAGACCTCAAATTTCCCGTCCTCATCGTCCATCGCGACATCAAGGCCGACACCGTTGCCGGCGAACGCGTGCG
GGGCATCGCCCACGAACTGGAGCAGGACGGCTTCAGCATTCTCTCCACCGCCAGCTCCGCCGAGGGGCGCATCGTCGCTT
CCACCCACCACGGCCTGGCCTGCATTCTGGTCGCCGCCGAAGGTGCCGGGGAAAACCAGCGCCTGCTGCAGGATGTGGTC
GAACTGATCCGCGTGGCCCGCGTGCGGGCGCCGCAATTGCCGATCTTCGCCCTCGGCGAGCAGGTGACCATCGAGAACGC
GCCGGCCGAGTCCATGGCCGACCTGCACCAGTTGCGCGGCATCCTCTACCTGTTCGAAGACACCGTGCCGTTCCTCGCCC
GCCAGGTCGCCCGGGCGGCGCGCAACTACCTGGCCGGGCTGCTGCCGCCATTCTTCCGTGCGCTGGTCGAGCACACCGCG
CAGTCCAACTATTCCTGGCATACGCCGGGCCACGGCGGCGGTGTCGCCTATCGCAAGAGTCCGGTGGGACAGGCGTTCCA
CCAGTTCTTCGGGGAGAACACGCTGCGTTCCGACCTGTCGGTCTCGGTCCCCGAGCTGGGATCGCTGCTCGACCATACCG
GCCCCCTGGCCGAGGCCGAGGACCGTGCCGCGCGCAATTTCGGCGCCGACCATACCTTCTTCGTGATCAATGGCACTTCC
ACCGCGAACAAGATCGTCTGGCACTCCATGGTCGGTCGCGAAGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGAT
CCTCCACTCGATCATCATGACCGGGGCGATACCGCTCTACCTGACTCCGGAACGCAACGAACTGGGGATCATCGGGCCGA
TCCCTCTGAGCGAATTCAGCAAGCAGTCGATCGCCGCGAAGATCGCCGCCAGCCCGCTGGCGCGCGGCCGCGAGCCGAAG
GTGAAGCTGGCGGTGGTGACTAACTCCACCTACGACGGCCTGTGCTACAACGCCGAGCTGATCAAGCAGACCCTCGGCGA
CAGCGTCGAGGTGTTGCACTTCGACGAGGCTTGGTACGCCTATGCCGCGTTCCACGAGTTCTACGACGGACGCTATGGCA
TGGGCACCTCGCGCAGCGAGGAGGGACCCCTGGTGTTCGCCACCCACTCCACGCACAAGATGCTCGCCGCCTTCAGCCAG
GCCTCGATGATCCACGTGCAGGATGGCGGGACCCGGAAGCTGGACGTGGCGCGCTTCAACGAAGCCTTCATGATGCACAT
CTCGACCTCGCCGCAGTACGGCATCATCGCTTCGCTGGACGTGGCTTCGGCGATGATGGAAGGGCCCGCCGGGCGTTCGC
TGATCCAGGAGACCTTCGACGAGGCCCTCAGCTTCCGCCGGGCCCTGGCCAACGTACGGCAGAACCTGGACCGGAACGAC
TGGTGGTTCGGCGTCTGGCAGCCGGAGCAGGTGGAGGGCACCGACCAGGTCGGCACCCATGACTGGGTGCTGGAGCCGAG
CGCCGACTGGCACGGCTTCGGCGATATCGCCGAAGACTACGTGCTGCTCGACCCGATCAAGGTCACCCTGACCACCCCGG
GCCTGAGCGCTGGCGGCAAGCTCAGCGAGCAGGGGATTCCGGCCGCCATCGTCAGCCGCTTCCTCTGGGAGCGCGGGCTG
GTGGTGGAGAAAACCGGTCTCTACTCCTTCCTGGTGCTGTTCTCGATGGGCATCACCAAGGGCAAGTGGAGCACCCTGGT
CACCGAACTGCTCGAATTCAAGCGCTGTTACGACGCCAACCTGCCGCTGCTTGACGTCTTGCCCTCCGTGGCCCAGGCCG
GCGGCAAGCGCTACAACGGCGTGGGCCTGCGCGACCTCAGCGACGCCATGCACGCCAGCTACCGCGACAACGCCACGGCG
AAGGCCATGAAGCGCATGTACACGGTGCTGCCGGAGGTCGCGATGCGGCCGTCCGAGGCCTACGACAAGCTGGTGCGCGG
CGAGGTCGAGGCGGTACCGATCGCTCGGTTGGAAGGGCGCATCGCTGCCGTCATGCTGGTACCCTATCCGCCGGGTATCC
CGCTGATCATGCCGGGTGAGCGCTTCACCGAGGCGACCCGCTCGATCCTCGACTATCTCGAGTTCGCGCGGACCTTCGAG
CGCGCCTTCCCTGGTTTCGACTCCGATGTGCACGGCCTGCAGCATCAGGACGGACCGTCCGGGCGCTGCTATACCGTTGA
ATGCATAAAGGAATGA

Protein sequence :
MYKDLKFPVLIVHRDIKADTVAGERVRGIAHELEQDGFSILSTASSAEGRIVASTHHGLACILVAAEGAGENQRLLQDVV
ELIRVARVRAPQLPIFALGEQVTIENAPAESMADLHQLRGILYLFEDTVPFLARQVARAARNYLAGLLPPFFRALVEHTA
QSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEDRAARNFGADHTFFVINGTS
TANKIVWHSMVGREDLVLVDRNCHKSILHSIIMTGAIPLYLTPERNELGIIGPIPLSEFSKQSIAAKIAASPLARGREPK
VKLAVVTNSTYDGLCYNAELIKQTLGDSVEVLHFDEAWYAYAAFHEFYDGRYGMGTSRSEEGPLVFATHSTHKMLAAFSQ
ASMIHVQDGGTRKLDVARFNEAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALANVRQNLDRND
WWFGVWQPEQVEGTDQVGTHDWVLEPSADWHGFGDIAEDYVLLDPIKVTLTTPGLSAGGKLSEQGIPAAIVSRFLWERGL
VVEKTGLYSFLVLFSMGITKGKWSTLVTELLEFKRCYDANLPLLDVLPSVAQAGGKRYNGVGLRDLSDAMHASYRDNATA
KAMKRMYTVLPEVAMRPSEAYDKLVRGEVEAVPIARLEGRIAAVMLVPYPPGIPLIMPGERFTEATRSILDYLEFARTFE
RAFPGFDSDVHGLQHQDGPSGRCYTVECIKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 2e-130 45
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 2e-127 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PLES_35091 YP_002441095.1 putative Orn/Arg/Lys decarboxylase VFG1670 Protein 1e-130 45