Name : xcpS (PLES_19581) Accession : YP_002439562.1 Strain : Pseudomonas aeruginosa LESB58 Genome accession: NC_011770 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2113269 - 2114486 bp Length : 1218 bp Strand : + Note : - DNA sequence : ATGGCCGCCTTCGAATACCTCGCCCTCGACCCCAGCGGTCGCCAGCAGAAGGGCGTGCTGGAGGCGGACAGCGCGCGCCA GGTCCGCCAGTTGCTGCGCGAGCGCCAATTGGCGCCGCTCGACGTGAAGCCCACCCGTACCCGCGAGCAGAGCGGGCAGG GCGGGCGCCTGACGTTCGCCCGCGGACTGTCCGCGCGCGACCTGGCATTGGTGACCCGGCAACTGGCGACCCTGGTCCAG GCCGCGTTGCCGATCGAGGAGGCGCTGCGCGCCGCCGCGGCGCAGTCCACCTCGCAGCGCATCCAGTCGATGCTTCTCGC GGTGCGCGCCAAGGTCCTCGAAGGCCATAGCCTGGCCGGCAGCCTGCGCGAGTTTCCCACCGCCTTTCCCGAGCTGTACC GGGCGACTGTGGCTGCCGGCGAGCATGCCGGGCACCTCGGCCCGGTGCTGGAGCAACTTGCCGACTACACCGAGCAGCGC CAGCAGTCGCGGCAGAAGATCCAGCTGGCGCTGCTCTATCCGGTGATCCTGATGGTCGCTTCGCTGGCCATCGTCGGCTT CCTGCTGGGCTACGTGGTGCCCGACGTGGTCCGGGTGTTCATCGACAGCGGGCAGACCCTGCCGCTGTTGACCCGCGTGC TGATCGGCGTCAGCGACTGGGTCAAGGCCTGGGGCGCGCTGGCCTTCGTCGCGGCGATCGGCGGGGTGATCGGCTTCCGC TACGCGCTGCGCAAGGATGCCTTTCGCGAGCGCTGGCATGGCTTCCTGCTGCGCGTGCCGCTGGTCGGTCGGCTGGTGCG TTCCACCGACACCGCGCGCTTCGCCTCGACCCTGGCGATCCTCACCCGCAGCGGCGTGCCGCTGGTGGAGGCGCTGGCGA TCGCCGCCGAGGTGATCGCCAACCGGATCATCCGCAACGAAGTGGTCAAGGCCGCGCAGAAGGTCCGCGAGGGCGCTAGC CTGACCCGCTCGCTGGAAGCCACCGGACAGTTCCCGCCGATGATGCTGCACATGATCGCCAGCGGCGAGCGCTCCGGCGA GCTGGACCAGATGCTGGCGCGCACCGCGCGCAACCAGGAGAACGACCTGGCGGCGCAGATCGGCCTGATGGTCGGCCTGT TCGAACCGTTCATGCTGATATTCATGGGCGCGGTGGTGCTGGTCATCGTCCTTGCCATTCTTCTTCCGATCCTTTCTCTC AACCAACTCGTGGGGTAA Protein sequence : MAAFEYLALDPSGRQQKGVLEADSARQVRQLLRERQLAPLDVKPTRTREQSGQGGRLTFARGLSARDLALVTRQLATLVQ AALPIEEALRAAAAQSTSQRIQSMLLAVRAKVLEGHSLAGSLREFPTAFPELYRATVAAGEHAGHLGPVLEQLADYTEQR QQSRQKIQLALLYPVILMVASLAIVGFLLGYVVPDVVRVFIDSGQTLPLLTRVLIGVSDWVKAWGALAFVAAIGGVIGFR YALRKDAFRERWHGFLLRVPLVGRLVRSTDTARFASTLAILTRSGVPLVEALAIAAEVIANRIIRNEVVKAAQKVREGAS LTRSLEATGQFPPMMLHMIASGERSGELDQMLARTARNQENDLAAQIGLMVGLFEPFMLIFMGAVVLVIVLAILLPILSL NQLVG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-56 | 46 |
gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-56 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
xcpS | YP_002439562.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-155 | 100 |
xcpS | YP_002439562.1 | general secretion pathway protein F | VFG2049 | Protein | 5e-55 | 46 |
xcpS | YP_002439562.1 | general secretion pathway protein F | VFG1870 | Protein | 2e-65 | 43 |