Gene Information

Name : PLES_12941 (PLES_12941)
Accession : YP_002438897.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Resistance
Product : putative metal-transporting P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1403748 - 1405886 bp
Length : 2139 bp
Strand : -
Note : orf01876

DNA sequence :
GTGGCCGCCATCGGAACCCTGGCCGGCAACGCCGAGTTGCGCTGGAGCGACCTGCGCATCGAAGCGATGGACTGCCCGAC
CGAGGAACGCCTGATCCGCGACGCCCTCGGTCGCCAGCCGGCAGTGGAGTCGCTGGAATTCAACCTGATGCAGCGCCTGC
TGCGCGTCCAGCATCGCTTCGACAGCGTCGAGCCGCTGCAGAAGCTGATCGCCGGCCTCGGCATGCAGGCGGTGCCGCTG
GATGCCGGCGAAAATACCGACGGCCCCTCGCAAGCGCCGGCGAAGCCCTGGTGGCCGCTGGCCCTGGCCGGCGCGATGGC
GCTGGCCTCGGAGATCGTCGAATGGTTCGGCCTGGCGCCGGACTGGGTGGTCGCCGGCCTCGCCCTGCTGGCCATCCTCG
GCGCCGGCCTGCCGACCTACCGCAAGGGCTGGATCGCACTGAAGAACCGTAACCTGAACATCAACGCCCTGATGAGTATC
GCCGTGACCGGCGCCGTGCTCATCGGCCAGTGGCCGGAAGCGGCGATGGTCAGCGTGCTGTTCGCCATCGCCGAGTTGAT
CGAGGCGAAGTCCCTGGATCGCGCGCGCAACGCCATCCGCGGCCTGCTGCAACTGGCTCCGGAACAGGCCACCGTGCTGG
TCGGCGGCGAATGGAAGGAACTGCCGGCCAAGCAAGTGGAACTGGAAGCCACCGTGCGCGTGAAGCCCGGCGAACGCATC
GCACTCGACGGCGAGGTGACCAGCGGCCGCTCCAGCGTCAACCAGGCGCCGATCACCGGCGAAAGCCTGCCGGTGGAGAA
GGAGGTCGGCGAGCCGGTGTTCGCCGGCAGCATCAACGGCGAGGGCGCGCTGGAGTACCGCGTCACCCGCCGCGCCGACG
ACAGCACCCTGGCCCGGATCATCCACGCCGTGGAGGAAGCCCAGGGTTCCCGCGCACCGACCCAGCGTTTCGTCGACAGT
TTCGCCCGCGTCTACACCCCGGTGGTATTCCTCATCGCCCTCGCCACCGCGGTGCTGCCGCCGCTGCTATTCGGCGGCGC
CTGGCTGGACTGGATCTACCGCGCCCTGGTGCTGCTGGTGATCGCCTGTCCCTGCGCGCTGGTGATCTCCACCCCGGTGA
CCATCGTCAGCGGCCTTTCCGCCGCGGCGCGCCTGGGCATCCTGATCAAGGGCGGGGTGTTCCTCGAACTCGGGCGCAAG
CTGTCCTGGGTCGCCCTCGACAAGACCGGCACCATCACCCATGGCAAACCGCAACAGACCGACTACCTGCCGATCGCGGA
GGCTGACGGGACGGATGCGCGCCTGCTCGCCGCCAGCCTGGCCGCGCGTTCCGACCACCCGGTATCGCGCGCCGTGGCCA
ACGCAGCGGAAGAGGACGGCCTTGCCCTGGGCGTGGTCGAGGACCTCGCTGCCTTGCCGGGACGAGGCGTCAGCGGACGC
ATCGACGGCGTCCTCTACCACCTCGGCAACCATCGCCTGGTGGAGGAACTGGGCCTCTGCTCGCCGGCCCTGGAAGAGCG
CCTGGACGCCCTGGAGCGCCAGGGCAAGACGGTCATCGCGCTGTGCGATCCGCAGCGCGTGCGGGCCCTCTTCGCCGTCG
CCGACGGGGTCAAGGACAGCAGCCGCGAGGCGATCCGCGAGCTGCACGCGCTGGACGTGAAGACCCTGATGCTCACCGGC
GACAACCCGCACACCGCAGCCGCCATCGCTGCCCAGGTAGGCATCGACGCAGCTCGCGGCAACCTCCTGCCGGAGGACAA
GCTGCGTGAAGTGGAAGCGCGCCAGGCCGACGGCTCGCGGGTCGGCATGGTCGGCGACGGGATCAACGACGCGCCGGCCC
TGGCCCGCGCCGACATCGGCTTCGCCATGGGCGCAGCGGGCACCGACACGGCCATCGAGACCGCCGGCGTCGCGCTGATG
GACGACGACCTGCGCAAGTTGCCGCAATTCGTCCGGCTGTCGCGCACCACCCACGCGATCCTGGTCCAGAACATCACCCT
GGCCCTGGGCATCAAGGCGGTGTTCCTCGCCCTTACCCTGGCAGGCGAAGGCACCCTGTGGATGGCGGTATTCGCCGACA
TGGGCGCCAGCCTGCTGGTGGTGTTCAACGGTCTGCGACTGTTGCGCAAGCGTTTCTAA

Protein sequence :
MAAIGTLAGNAELRWSDLRIEAMDCPTEERLIRDALGRQPAVESLEFNLMQRLLRVQHRFDSVEPLQKLIAGLGMQAVPL
DAGENTDGPSQAPAKPWWPLALAGAMALASEIVEWFGLAPDWVVAGLALLAILGAGLPTYRKGWIALKNRNLNINALMSI
AVTGAVLIGQWPEAAMVSVLFAIAELIEAKSLDRARNAIRGLLQLAPEQATVLVGGEWKELPAKQVELEATVRVKPGERI
ALDGEVTSGRSSVNQAPITGESLPVEKEVGEPVFAGSINGEGALEYRVTRRADDSTLARIIHAVEEAQGSRAPTQRFVDS
FARVYTPVVFLIALATAVLPPLLFGGAWLDWIYRALVLLVIACPCALVISTPVTIVSGLSAAARLGILIKGGVFLELGRK
LSWVALDKTGTITHGKPQQTDYLPIAEADGTDARLLAASLAARSDHPVSRAVANAAEEDGLALGVVEDLAALPGRGVSGR
IDGVLYHLGNHRLVEELGLCSPALEERLDALERQGKTVIALCDPQRVRALFAVADGVKDSSREAIRELHALDVKTLMLTG
DNPHTAAAIAAQVGIDAARGNLLPEDKLREVEARQADGSRVGMVGDGINDAPALARADIGFAMGAAGTDTAIETAGVALM
DDDLRKLPQFVRLSRTTHAILVQNITLALGIKAVFLALTLAGEGTLWMAVFADMGASLLVVFNGLRLLRKRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 67
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 7e-120 48
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 6e-120 48
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 2e-119 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PLES_12941 YP_002438897.1 putative metal-transporting P-type ATPase BAC0298 Protein 0.0 70
PLES_12941 YP_002438897.1 putative metal-transporting P-type ATPase BAC0461 Protein 1e-84 42
PLES_12941 YP_002438897.1 putative metal-transporting P-type ATPase BAC0100 Protein 8e-61 42