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Name : DvMF_0870 (DvMF_0870) Accession : YP_002435294.1 Strain : Desulfovibrio vulgaris Miyazaki F Genome accession: NC_011769 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1047322 - 1049592 bp Length : 2271 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: DNA-binding protein; Resolvase RNase H domain protein fold; KEGG: dde:Dde_2316 RNA-binding domain-containing protein DNA sequence : GTGACGCCAGAACTTCAGGCCACCGCTTCCGCCCCGGCAGCCCCAACCGGTCCGACCGCTCCCGCGGTTGCGCCAGCCGC ACCGATCTCCGCAGCTCCGGCGGCCTTGGCCGCCGCGCTGTCCCTGCCGGTATCCGGCGTCTCCGCCGTCATGGCCCTGC TGGACGAAGGGGCCACCATTCCCTTCATCGCCCGCTACCGCAAGGAAGCCACTGGCAGCCTGGACGAGGTGCAGGTGGTC GCCGTGCGTGATGCCCTGGAAAAGGCGCGCGAACTGGACAAGCGACGGGCGGCGGTGCTGGCATCGCTGGAGGAACGCGG CCTGCTCACCCCGCAACTGGCGGGGGCAGTGGCCGGTGCATCCACCCTCACCGCGCTGGAGGACGTGTACCTCCCCTACC GGCCAAAGCGCGTCACCCGCGCGGAAAAGGCCCGGCGGCGCGGGCTGGCCCCGCTGGCGGAAGCACTGCGCACCGCGCGG CCCACGGCGGACGCCCTTGCGCTTGCCGCGCCCCATGTAACGTCCCATGCCACCCCGGAAGGCGCCGACCCGGAACTGGC CGTGCCCGATGTGCAGGCCGCCCTGGCCGGTGCCCGGGACATCCTGGCCGAAAACTGCGCGGAATCCGCCCCCCTGCGCG GAGCCCTGCGCGACCTGTTCGTGCGGCGCGCCGTGCTGCGCGCCAGGGCCGTACCCGGCAAGGAGGCGGAAGGCGCCACC TACGCCGACTGGTTCGGCCACGAGGAACGCGCCGCCGCCATGCCCTCGCACCGCCTGCTGGCCATGCTGCGCGGCGAACG CGAAGGCTTTCTTTCCGTGTCCGTGCGCCCCGACGACGCCGAGGCCCTGGACACCCTCCACCGCCGGGCGGGCATCGCCG CCCCCGGCACCGCCCCACGGCCCGAAACCGCCGCAGGGCAGGTGGAGGCGGCCCTTGCCGATGCCTGGAAGCGGCTGCTG GCCCCATCGCTGGAAAACGAACTGCGCACCGCCCTGCGCGAGCGGGCAGAGGCGCAGGCCATCGGGGTGTTCGCCGCCAA CCTGCGCGAACTGATCATGGCCCCGCCCCTGGGCGGGCGCCGCGTGCTGGCGCTGGACCCCGGCTGGCGCACCGGGTCCA AGCTGGTCTGCCTGGACGCTCAGGGCACCCTGCTGCACCACGAGGTCATTCATCCGCTTACGGGCGATGCCGGTGCGGAA CGCGCCGCGCGCACCCTGCGCGACTGCTGCGCCAGGTACGCCATGGAGGTGGTGGCCGTGGGCAACGGCACCGCCGGGCG CGAGACGGAAGCCTTCGTGCGTAACGCGGGCCTGCCCGCCGGAGTGGACGTAGTACTGGTGAACGAAACCGGGGCCTCGG TGTATTCCGCGTCCGAGGTGGCCCGCCGCGAATTTCCGGACCACGACCTGACCGTGCGCGGGGCCGTTTCCATCGGGCGG CGGCTGATGGACCCGCTGGCGGAATTGGTGAAGATCGACCCGCGCTCGCTGGGCGTTGGCCAGTACCAGCACGACGTGGA CCAGGCCGCCCTGCGCCGCTCTCTGGACGAGGTGGTGGCCTCGTGCGTCAACGCAGTCGGCGTGGACGCCAACACCGCCA GCCCGGAACTGCTGGCCCATGTTTCCGGCATCGGCCCGGTGCTGGCCCGCAACATTGTGGCCCACCGGGCGGAAAACGGC CCCTTCCGCAACCGCAGGGATCTGCTGAAGGTGCCGCGCCTCGGCCCCAAGGCATTCGAACAGGCGGCAGGCTTTCTGCG CGTGCGCGGCGACAACCCGCTGGACGCCAGCGCGGTGCACCCGGAACGTTATGCCCTTGTGGCCCGCATGGCGGCGGACC TCGGCTGCGCCCTGGCCGACCTGCTGCGCCGCGACGACCTGCGCAGGCGCATCCGGCCCGAACAGTACGTTGCCGACGGC GTGGGCCTGCCCACGCTCACCGACATCCTGGCCGAACTGGCACGGCCGGGGCGCGACCCGCGCCCGTCGTTCGCCCCGTT CCGCTTCGCCGAAGGGGTGCATTCTCCCGACGACCTGGAGCCGGGCATGGTGCTGCCGGGCATCGTCACCAACGTCACCG CCTTCGGGGCATTCGTGGACATAGGGGTGCACCGCGACGGGCTGGTGCATGTCAGCCAGCTGTCCGACCGCTTCGTGCGC GACCCGGCGGAAGTGGTGGCCCCGGGGCGCACCGTGCGGGTGCGGGTGCTGGAGGTGGACCGGGCGCGTGGCAGGGTGAG CCTGACCATGAAGGGCGTGGACCAGCAGTAG Protein sequence : MTPELQATASAPAAPTGPTAPAVAPAAPISAAPAALAAALSLPVSGVSAVMALLDEGATIPFIARYRKEATGSLDEVQVV AVRDALEKARELDKRRAAVLASLEERGLLTPQLAGAVAGASTLTALEDVYLPYRPKRVTRAEKARRRGLAPLAEALRTAR PTADALALAAPHVTSHATPEGADPELAVPDVQAALAGARDILAENCAESAPLRGALRDLFVRRAVLRARAVPGKEAEGAT YADWFGHEERAAAMPSHRLLAMLRGEREGFLSVSVRPDDAEALDTLHRRAGIAAPGTAPRPETAAGQVEAALADAWKRLL APSLENELRTALRERAEAQAIGVFAANLRELIMAPPLGGRRVLALDPGWRTGSKLVCLDAQGTLLHHEVIHPLTGDAGAE RAARTLRDCCARYAMEVVAVGNGTAGRETEAFVRNAGLPAGVDVVLVNETGASVYSASEVARREFPDHDLTVRGAVSIGR RLMDPLAELVKIDPRSLGVGQYQHDVDQAALRRSLDEVVASCVNAVGVDANTASPELLAHVSGIGPVLARNIVAHRAENG PFRNRRDLLKVPRLGPKAFEQAAGFLRVRGDNPLDASAVHPERYALVARMAADLGCALADLLRRDDLRRRIRPEQYVADG VGLPTLTDILAELARPGRDPRPSFAPFRFAEGVHSPDDLEPGMVLPGIVTNVTAFGAFVDIGVHRDGLVHVSQLSDRFVR DPAEVVAPGRTVRVRVLEVDRARGRVSLTMKGVDQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-141 | 49 |
