Gene Information

Name : DvMF_0862 (DvMF_0862)
Accession : YP_002435286.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 1038070 - 1038816 bp
Length : 747 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_2308 ATPase

DNA sequence : 
ATGACCGCCGATAGCGTCGAACCCATCATCCGCATCAGCCACGCCTGGAAGTTCTTCGGCGAGCTGACGGCCCTCAACGA
CGTCAGCCTTGACGTGATGCCCGGCGAAAAGGTGGTCATCTGCGGTCCGTCCGGCTCGGGCAAGTCCACCCTGCTGCGCT
CCATCAACCGGCTGGAAACGGTGGACAAGGGCACCATCATCGTGGACGGGCAGGACGTGAACTCACCCGACAACGACATC
AACAAGATCCGCCAGGAACTGGGCATGGTCTTCCAGAGCTTCAACCTCTTTCCGCACAAGACCGTGCTGCAGAACCTGAC
CATGGCCCCCATGCGGCTGCGCAAGACCCCGCGCGCCGAGGCGGAAAGCCGGGCGCTGGAACTGCTGAAGAAGGTGGGCA
TCAGCGACAAGGCCAACGTGTTTCCGGCCATGCTTTCGGGCGGGCAGCAACAGCGCGTGGCCATTGCCCGCGCCCTGGCC
ATGAACCCCAAGATCATGCTGTTCGACGAGCCTACCAGCGCCCTGGACCCGGAAATGATCGGCGAAGTGCTGGACGTCAT
GGTGACCCTGGCCCGCGAAGGCATGACCATGGTCTGCGTGACCCACGAAATGGGCTTTGCCCGCGAAGTGGCCGACCGCA
TCATCTTCATGGACCATGGCCAGGTGCTGGAAGAAAACGCGCCCCAGGATTTCTTCGGCGCGCCCAAGCACCCGCGCCTT
CAGAAATTCCTGAACCAGATCCTGTAG

Protein sequence : 
MTADSVEPIIRISHAWKFFGELTALNDVSLDVMPGEKVVICGPSGSGKSTLLRSINRLETVDKGTIIVDGQDVNSPDNDI
NKIRQELGMVFQSFNLFPHKTVLQNLTMAPMRLRKTPRAEAESRALELLKKVGISDKANVFPAMLSGGQQQRVAIARALA
MNPKIMLFDEPTSALDPEMIGEVLDVMVTLAREGMTMVCVTHEMGFAREVADRIIFMDHGQVLEENAPQDFFGAPKHPRL
QKFLNQIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-27 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DvMF_0862 YP_002435286.1 ABC transporter NC_012469.1.7686878. Protein 3e-29 43