Gene Information

Name : DvMF_0630 (DvMF_0630)
Accession : YP_002435055.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 752549 - 753355 bp
Length : 807 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gsu:GSU1162 ABC transporter ATP-binding protein

DNA sequence :
ATGAGCCACGCGCAGGAATCCGCCGTTCCTCTCCCCTCCGTCGCGCCGGACCGCACGCCGGACGGCACGGCGGGCACGGC
TGTCGCGCCCGGCACCGCGCCCCCTCTTGCGTCGCCGCGCCCGGCCAGCCCGCCCATTTTTCTGCAAGGCGTCTCCAAGG
CCTACAGGCGGGGCGCGCAGGTGGTGCCGGTGCTGACCAACGTGAACATGACTGTGGCCCCCGGCGAGTTCCTGGCGCTG
ATGGGGCCGTCCGGCTCCGGCAAATCCACGCTGCTCAACCTCATCGCGGGCATCGACCGGGTGGACGCGGGGGCCGTCTT
CGTGGGTGAAACGGACATCACCACCCTGGACGACGCAGACCTGGCCCGCTGGCGCAGCCGCAGCGTGGGGTTCATCTTCC
AGTTCTACAATCTCATCCCGGTGCTGAACGCTCTGGAAAACGTGGAACTGCCGCTCTTGCTCACGCCCCTGTCCGGGCAC
GAACGGCGGGAACGGGCGCGCACCGCGCTGGCCATGGTGGGCCTGTCCGACCGCATGGACCATTACCCCGGCCAGCTTTC
CGGCGGGCAGCAGCAGCGCACCGCCATCGCCCGCGCCCTGGTGGCCGACCCGGACATCCTGGTGGCCGACGAACCCACCG
GCGACCTGGACCGCGTGTCCGCCGGGGAAATCCTGAACCTCATGGACGGGTTGAACCGCACCATGGGCAAGACCATCATC
ATGGTCACCCACGACCCGCGCGCGGCGGAACGGGCGGGCCGCCTGCTGCTGCTGGAAAAGGGCGAGCTGGCCGATGCTCA
CGCTTAA

Protein sequence :
MSHAQESAVPLPSVAPDRTPDGTAGTAVAPGTAPPLASPRPASPPIFLQGVSKAYRRGAQVVPVLTNVNMTVAPGEFLAL
MGPSGSGKSTLLNLIAGIDRVDAGAVFVGETDITTLDDADLARWRSRSVGFIFQFYNLIPVLNALENVELPLLLTPLSGH
ERRERARTALAMVGLSDRMDHYPGQLSGGQQQRTAIARALVADPDILVADEPTGDLDRVSAGEILNLMDGLNRTMGKTII
MVTHDPRAAERAGRLLLLEKGELADAHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-30 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 46
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DvMF_0630 YP_002435055.1 ABC transporter NC_012469.1.7686878. Protein 3e-40 49
DvMF_0630 YP_002435055.1 ABC transporter NC_008702.1.4606598. Protein 6e-34 48
DvMF_0630 YP_002435055.1 ABC transporter CP001581.1.gene798.p Protein 6e-34 42