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Name : DvMF_2993 (DvMF_2993) Accession : YP_002437398.1 Strain : Desulfovibrio vulgaris Miyazaki F Genome accession: NC_011769 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3776852 - 3778357 bp Length : 1506 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dde:Dde_1365 lysyl-tRNA synthetase DNA sequence : ATGCTCGAAAGCCTAGAAACCCGCGACGAACTGAACGAAGTCGTCAAGAACCGGGTGGTCAAATCCTGTGAACTGCTGGA CGACGGCGTAGCCCTGTACCCCAACGGTTTCGTGAAACAGCACGACGTGGCGGCCATTTCGGCCGAATACGAGGGGCTGA CCGCAGAGGAACTGGAAAACGTCGACACGCGCTTCACCTGCGCGGGGCGCATCGTCTCGCAGCGCTCGTTCGGCAAGGTG ACCTTCTTCCATCTGATGGACAAGAGCGGTCGGCTGCAATGCTACACCGCGCGCGAGGTGCTGGGCGAAGACCCGTACCG CAACTTCAAGAAACTGGACATCGGCGACATCGTGGGTGTTTCCGGCACACTGTTCCGCACCAAGACGGGTGAACTGACCC TGTCGTGCGACCAGTGCATCCTGCTCACCAAGTCCATCCGGCCCCTGCCCGAAAAGTACCACGGCCTGAAGGACGTGGAG ACCCGCTACCGTCAGCGTTACGTGGACCTCATCGTCACGCCGCGCACGCGCGAGATTTTCCGCAAGCGCACCCTGATCGT GCGCGAGTTCCGCCGCTTCCTGGAGGACAAGGGCTTCATGGAGGTGGAAACCCCCATGATGCAGCCCATTCCCGGCGGCG CCACGGCCATGCCGTTCATCACCCACCACAATGCGCTGGACATGCAGCTGTACATGCGCATCGCGCCGGAATTGTACCTG AAGCGCCTGCTGGTGGGCGGGTTCGAGAAGGTGTTCGAGATCAACCGCAACTTCCGCAACGAAGGCATCTCTACCCGGCA CAACCCGGAATTCACCATGTGTGAATTCTACTGGGCCTACGCCACCTTCGAAGACCTGATGGACCTGACCGAACAGCTGT TCGCCCACGTGGCGGAAAAGGTGTGCGGCTCGTACGTGGTGACCTACCAGGGCCAGGAAGTGGACCTTACCCCGGGCCGC TGGACGCGCCTTTCGTTCCATGACTCGCTGGAGAAGATCGGCGGACACAAACCGGAATTCTACAACGATTACGAAGCGGT GCGCAAATACATCCGCGAACGGGGCGAAAAGGTTGTGGACGGCGAGAAGATGGCCAAGTTGCAGGCCAAGCTGTTCGACC TGGACGTGGAAGGCAAGCTGATCCAGCCCACCTTCATCTATCACTATCCCACCGACATCTCGCCGCTGTCGCGCCGCAAC AACGAGCGGCCCGACGTGACGGACCGCTTCGAGCTGTTCATCACCGGGCGCGAGCTGGGCAACGCCTTCTCCGAACTGAA CGACCCCGTGGACCAGCGCATGCGCTTCATGGACCAGGTGGCCGAAAAGGAAGCGGGCGACGCCGAGGCGCACTTCATGG ACGAGGACTACCTGCGCGCCCTGGAATACGGCATGCCGCCGGCGGCGGGAGAGGGCGTGGGCATCGACCGCCTGGTCATG CTGCTGACCGACTCGCCCTCCATCCGCGAGGTCATCCTGTTCCCGCTGCTGAAGCCGGAAAGCTAG Protein sequence : MLESLETRDELNEVVKNRVVKSCELLDDGVALYPNGFVKQHDVAAISAEYEGLTAEELENVDTRFTCAGRIVSQRSFGKV TFFHLMDKSGRLQCYTAREVLGEDPYRNFKKLDIGDIVGVSGTLFRTKTGELTLSCDQCILLTKSIRPLPEKYHGLKDVE TRYRQRYVDLIVTPRTREIFRKRTLIVREFRRFLEDKGFMEVETPMMQPIPGGATAMPFITHHNALDMQLYMRIAPELYL KRLLVGGFEKVFEINRNFRNEGISTRHNPEFTMCEFYWAYATFEDLMDLTEQLFAHVAEKVCGSYVVTYQGQEVDLTPGR WTRLSFHDSLEKIGGHKPEFYNDYEAVRKYIRERGEKVVDGEKMAKLQAKLFDLDVEGKLIQPTFIYHYPTDISPLSRRN NERPDVTDRFELFITGRELGNAFSELNDPVDQRMRFMDQVAEKEAGDAEAHFMDEDYLRALEYGMPPAAGEGVGIDRLVM LLTDSPSIREVILFPLLKPES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-117 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DvMF_2993 | YP_002437398.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-117 | 53 |
