Gene Information

Name : DvMF_2955 (DvMF_2955)
Accession : YP_002437360.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3727686 - 3728438 bp
Length : 753 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_1339 ATPase

DNA sequence :
ATGAGCACGCCCCCCATCTCCACTCCCGGCGGCGCGCCCGGCGCGCCGCTGGTCGAGCTGTCCGGCATCACCCGCAGCTT
CACGCAGGGCGACCTGACCGTGGACGTGCTGCGCGGCGTCAGCTTTTCCATCGCGCACGGCGAGTTCGTGGCCATCCAGG
GGTCTTCCGGCTCCGGCAAGTCCACGCTGCTGCACATCCTGGGCCTGCTGGACAGCCCCACATCGGGCCGCTACGTGCTG
GACGGACACGACGTGTCGCACCTGGACGACGACGCCCGGTCGGAGGCACGCAACCAGTTGACCGGCTTCGTGTTCCAGAA
CTTCTACCTCATCCCCTACGCCACAGCGCTGGACAACGTGCTGCTGCCGGGCCTGTACAGCCACAAGAACCTGCGCGCCC
AGCGCAAGCGGGCGGAAAACCTGCTGCACCGCGTGGGCCTGGGCGACCGCATGGACTTCGTGCCCGCCCGCCTTTCCGGT
GGGCAGCAGCAGCGCGTGGCCCTGGCCCGCGCCCTGCTGAACGACCCCGCCCTGATCCTGGCCGACGAACCCACCGGCCA
GCTCGATTCCACCACCAGCGCGGACATCCTGGACCTGCTCGCGGACATCAACCGCACCGGCAAAACCGTGGTGGTGGTGA
CCCACGACGCGGAAACCGCCGCCCGCGCGCGGCGGCGCATCGTCATCCGCGACGGGGTCATCGAAAGCGACGGCCTGCAG
GGCGGCGCCGCGGCAGGTGGAGCCCCGGCATGA

Protein sequence :
MSTPPISTPGGAPGAPLVELSGITRSFTQGDLTVDVLRGVSFSIAHGEFVAIQGSSGSGKSTLLHILGLLDSPTSGRYVL
DGHDVSHLDDDARSEARNQLTGFVFQNFYLIPYATALDNVLLPGLYSHKNLRAQRKRAENLLHRVGLGDRMDFVPARLSG
GQQQRVALARALLNDPALILADEPTGQLDSTTSADILDLLADINRTGKTVVVVTHDAETAARARRRIVIRDGVIESDGLQ
GGAAAGGAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DvMF_2955 YP_002437360.1 ABC transporter NC_012469.1.7686878. Protein 1e-51 52
DvMF_2955 YP_002437360.1 ABC transporter NC_008702.1.4606598. Protein 1e-36 49
DvMF_2955 YP_002437360.1 ABC transporter CP001581.1.gene798.p Protein 1e-37 43
DvMF_2955 YP_002437360.1 ABC transporter NC_012469.1.7686946. Protein 4e-28 42