Gene Information

Name : DvMF_2576 (DvMF_2576)
Accession : YP_002436983.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit beta
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 3256929 - 3259025 bp
Length : 2097 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase subunit beta; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: aba:acid345_0511 potassium-translocating P-type

DNA sequence :
ATGAAACGTTCACGCCCCCTCTCGCACGACCCCGCCCTGTACCGCCGCGCGGTGCGGGACGCCTTCCGCAAGCTGGACCC
GCGCGTGCTGGCCAGAAACCCCGTCATGTTCGTGGTGGGTGCGGGCAGCCTGCTGACCACCGCCGCCTTCCTGCACGACC
TTGCCCTGCACGGGTGGTCGGCCCGCGCGGCCTTTGGCGGGCAGATCAGCCTGTGGCTGTGGGCCACGGTGCTGTTCGCC
AACTTCGCAGAAGCGCTGGCCGAAGGGCGCGGCAAGGCCCAGGCCGACACCCTGCGCAACGCCCGGCGCGACACCCCGGC
CCTGCGCCTGCGCAGCGGCGGCACCACCGAAGAGGTTTCCGCCTCGGCCCTGCTGCCCGACGACGTGGTGGTGGTGGAAG
CGGGCCGGATGATCCCCGCCGACGGCACCGTGGTGGAAGGCGCCGCCGCCGTGGACGAATCGGCCATCACCGGCGAATCG
GCCCCGGTGGTGCGCGAATCCGGCGGCGACCGCAGCGCGGTGACCGGCGGCACCACGGTGCTGTCCGACCGGCTGGTGAT
CCGCGTGACGCAGGAGCCGGGCAAGTCCTTCCTCGACAGGATGATCGCCCTTGTGGAAGGCGCGGAACGCCAGAAGACCC
CGAACGAGATTGCCCTGAACATCCTGCTGGCCGGGCTGACCATCGTCTTCCTGCTGGCTGTGGTCACCCTGAAGCCGTTC
GCCCTGTTTCACGACGTGAATCTGGGCGTGGTGGTGCTGGTGGCCCTGCTGGTGTGCCTGATTCCCACCACCATCGGCGG
GCTGCTGGCGGCCATCGGCATTGCGGGCATGGACCGCCTGCTGCGCCGCAACGTGCTGGCCATGTCGGGCCGCGCGGTGG
AGGCGGCGGGCGACGTGGACGTGCTGCTGCTGGACAAGACCGGCACCATCACCCTGGGCAACCGCATGGCCGCCGACTTC
GCGCCGCTGGCCGGCGTGGACCGGGCGGAGCTGGTGCGCGCCGCGCTGCTGGCCTCGTCCGGCGACGAAACACCGGAAGG
CCGGTCCATCGTGGATCTGGCCCGGCAGCAGGGCGGCGACGCCACGCCCGCCGCCCACGGGCACATCACCCGCATCCCCT
TCAGCGCGCAAACCCGCATGAGCGGCATCGACCAGCCGGGCGAACAACTGCGCAAGGGCGCGACGGATGCGGTGCTGGCC
TGGGTTGGTGGATTGGCCGGACCGGATGGATTGGACAAATCGCATCTGCCCGAAGCAGCCAGCCGCAACGGAGCCGCCCG
GCACGAGGAGGCCCACCGCCTGGCCGACGCCATCGCCAGCCAGGGCGGCACCCCGCTGGTGGTGGCCTCGTCCGTGGCGG
GCGTGCTGGGGGTCATCCACCTGAAGGACGTGGTCAAGCCGGGCATGCGCGACCGCTTCGAGCGCATCCGGGCCATGGGC
ATCCGCACGGTGATGATCACCGGCGACAACCGGCTGACGGCGCAGGCCATCGCCGCCGAGGCGGGCGTGGACGACTACCT
TGCCGAGGCGAAACCGGAAGACAAGCTGCACCTCATCGTGGACCTGCAAAAGGGCGGGCGGCTGGTGGCCATGTCCGGCG
ACGGCACCAACGACGCGCCCGCGCTGGCCCAGTCGGACGTGGGGCTGGTGATGAACACCGGCACCCAGGCCGCGCGCGAG
GCGGGCAACATGATCGACCTGGATTCCGACCCCACCAAGCTCATAGAAATCGTGGAGATCGGCAAGCAACTGCTGATCAC
GCGGGGGGCGCTGACCACCTTCAGCGTATCCAACGACGTGGCCAAGTACTTCGCCATCATTCCCGCGCTGTTCGCCGCAT
CGCTGCCGCAACTGGGCGCGCTGGACGTGATGCGCCTGTCCAGCCCGGAAAGCGCCGTGCTCTCCGCCGTGATCTTCAAC
GCGCTGATCATCGTGGCGCTCATCCCGCTGGCCCTGCGCGGGGTGCGCTACCGCCCGCGCGGCACGGCGCATGCGCTGCG
CACAAACCTGCTGGTCTACGGGCTGGGCGGGCTGGTGGCCCCGTTCGTCGGCATCAAGTGCATCGACCTGCTTATCACCG
CCCTCGGGCTGGTGTAG

Protein sequence :
MKRSRPLSHDPALYRRAVRDAFRKLDPRVLARNPVMFVVGAGSLLTTAAFLHDLALHGWSARAAFGGQISLWLWATVLFA
NFAEALAEGRGKAQADTLRNARRDTPALRLRSGGTTEEVSASALLPDDVVVVEAGRMIPADGTVVEGAAAVDESAITGES
APVVRESGGDRSAVTGGTTVLSDRLVIRVTQEPGKSFLDRMIALVEGAERQKTPNEIALNILLAGLTIVFLLAVVTLKPF
ALFHDVNLGVVVLVALLVCLIPTTIGGLLAAIGIAGMDRLLRRNVLAMSGRAVEAAGDVDVLLLDKTGTITLGNRMAADF
APLAGVDRAELVRAALLASSGDETPEGRSIVDLARQQGGDATPAAHGHITRIPFSAQTRMSGIDQPGEQLRKGATDAVLA
WVGGLAGPDGLDKSHLPEAASRNGAARHEEAHRLADAIASQGGTPLVVASSVAGVLGVIHLKDVVKPGMRDRFERIRAMG
IRTVMITGDNRLTAQAIAAEAGVDDYLAEAKPEDKLHLIVDLQKGGRLVAMSGDGTNDAPALAQSDVGLVMNTGTQAARE
AGNMIDLDSDPTKLIEIVEIGKQLLITRGALTTFSVSNDVAKYFAIIPALFAASLPQLGALDVMRLSSPESAVLSAVIFN
ALIIVALIPLALRGVRYRPRGTAHALRTNLLVYGLGGLVAPFVGIKCIDLLITALGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-152 56
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-151 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-132 54
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-131 53
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-131 53
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-131 53
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-131 53
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-131 53