Gene Information

Name : DvMF_2432 (DvMF_2432)
Accession : YP_002436841.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Virulence
Product : type III secretion apparatus lipoprotein, YscJ/HrcJ family
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 3067990 - 3068823 bp
Length : 834 bp
Strand : +
Note : TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: lip:LI0543 LscJ

DNA sequence : 
ATGAACGGATGGCGCGGCATGTTACACCAGGCCCCGCGCGGGTTGCGCAACGCGGCACTGGCCGTATTTCTGCTCATGCT
GCTGACGGGCTGCAAGGCGGAACTGTACAAGGGGCTGAACGAGGAACAGGCCAATACCATGCTGGCCACCCTGCTGCGAC
ACGGCGTACCCGCCGAAAAGCTGGCGGCGGGCAAGGAAGGCTACGCCCTTTCGGTGGAGCGCGACCAGATCGTGCGGGCG
CTGGAAATCCTGCGTGAAAACAGCCTGCCCCGCGAGCAGTACCAGAACCTCGGCAAGGTCTTTTCCGGCGACGGCATGAT
CGCCTCGCCCTCCGAGGAAAAGGCGCGCCTTGCCTACGCCATTTCCCAGGAACTTTCCGATACCTTCTCGCGCATCGACG
GGGTGCTCACCGCGCGCGTGCACGTGGTGCTGGCCAGCAGCGAAACGGCGTCCGAGACCAGGGTGCCCGCGTCGGCGGCG
GTGTTCCTGCGCCACGGGCCGGAATCGCCGGTGGTCAATCTGATCCCGAAGATTCGCGAACTGGCGGCCAAGGCGGTGCC
GGGGCTGGACTACGAAAGGGTTTCGGTCATGCTGGTGCCGGTGCGTGAAACCGTCACCGTGCCCATGCAGCAGGGGGCGA
CGCTGTTCGGCATGCCCCTGCCGTCGGAAAGCGGGCCGTCGTACCTGCTGGTGGCGGCGGGTGTGACCCTGCTGGCGGCC
CTGGCCGGGCTGGCCTTTGCCGGGGCGCGCACCGGGCTCATCGCCTTTGGCGCGCGGCGTTCCGCGTCGGGCGATGCCCG
CGCGGCCCGTGGGCCGCAGGGCGGACAGGGCTAG

Protein sequence : 
MNGWRGMLHQAPRGLRNAALAVFLLMLLTGCKAELYKGLNEEQANTMLATLLRHGVPAEKLAAGKEGYALSVERDQIVRA
LEILRENSLPREQYQNLGKVFSGDGMIASPSEEKARLAYAISQELSDTFSRIDGVLTARVHVVLASSETASETRVPASAA
VFLRHGPESPVVNLIPKIRELAAKAVPGLDYERVSVMLVPVRETVTVPMQQGATLFGMPLPSESGPSYLLVAAGVTLLAA
LAGLAFAGARTGLIAFGARRSASGDARAARGPQGGQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscJ AAO18027.1 LscJ Virulence TTSS locus Protein 5e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DvMF_2432 YP_002436841.1 type III secretion apparatus lipoprotein, YscJ/HrcJ family VFG0218 Protein 4e-36 42