Gene Information

Name : DvMF_2371 (DvMF_2371)
Accession : YP_002436780.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 2991194 - 2992006 bp
Length : 813 bp
Strand : -
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence :
ATGACGGCATTTCCCACCTGCTACGGCATCATTCCCGCACGCTACGCCTCGTCCCGTTTTCCCGGCAAGCCGCTGGCCGA
CATCGCGGGCATGCCCATGTTCTGGCATGTGTACCAGCGCGCGGCCCGTTGCCCGGAACTGTGCAAGGTGGTGCTGGCCA
CGGACGACGAACGCATTGCGCAGGCCGCGCACCGGTTGGATGTGCCTTTCGTCATGACCCGGCCCGACCATGAAAGCGGC
ACCGACCGGGTGTACGAGGCGGCCTGCCTGCTGGGCCGTGATCTGGAATCGTCCGGCAAGGCGGGGCTGCCCGACGACGC
GGTGGTGGTGAACATCCAGGGCGACGAGCCCGCGCTGGACCCGCGCATGCTCAGCCAACTGGTGGCCCCGTTCACTGCGG
CAAAGGACGGCGCGCGGGTGCGCGTTGCCACCCTGGCCATGGCCATCGACGCGGCGGAAGCCGCCAGCCCCGACCGGGTC
AAGGTGGTCACGGCGGTCAACGGCGACGCACTGTACTTTTCGCGCGCGGCCATCCCCTTCGCACGGGACGGCGGCGTGCA
GGCGGGCGATGCGGCTGCCGGTCCGGCCTACCTTGGCCATGTCGGGCTCTACGCCTTCCGGCTGGAGGCGTTGCGCGCCT
TCACGCAACTGGCGCCCTCTTCCCTTGAGCGGCGCGAGAAACTGGAGCAGCTGCGGCTGCTCGAAAACGGCATTCCCATC
CGGGTCGTGCCCACCACCTACCGTACCCACGGGGTGGACCGGCCCGAAGACATCGGCATCATCATCAACCTGCTTGGGGA
GAACGAAGGATGA

Protein sequence :
MTAFPTCYGIIPARYASSRFPGKPLADIAGMPMFWHVYQRAARCPELCKVVLATDDERIAQAAHRLDVPFVMTRPDHESG
TDRVYEAACLLGRDLESSGKAGLPDDAVVVNIQGDEPALDPRMLSQLVAPFTAAKDGARVRVATLAMAIDAAEAASPDRV
KVVTAVNGDALYFSRAAIPFARDGGVQAGDAAAGPAYLGHVGLYAFRLEALRAFTQLAPSSLERREKLEQLRLLENGIPI
RVVPTTYRTHGVDRPEDIGIIINLLGENEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 7e-30 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 3e-30 42
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 4e-30 42