|
Name : DvMF_2280 (DvMF_2280) Accession : YP_002436690.1 Strain : Desulfovibrio vulgaris Miyazaki F Genome accession: NC_011769 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 2868302 - 2869330 bp Length : 1029 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: dde:Dde_0358 NAD-dependent epimerase/dehydratase family protein DNA sequence : ATGACCCGTTATACCGCCCTGATGCAGGAACTGGAAGCCGCCCCCCGCACCTGGCTTGTCACCGGGGTTGCCGGATTCAT TGGCTCCAACCTGCTCGAAACGCTGTTGATGCACGGTCAGAAGGTGGTGGGGCTGGACAACTTCGCCACCGGCTATCAGC GCAACCTGGACATGGTGCGCGAAATCGTGGGCGCGGACCTGTGGCGCAACTTCCGCTTCAAGGAAGGCGACATCCGCAAC CTGGAGCACTGCCGCGAGGTGTGCGAAGGCGTGGACCACGTGCTGCACCAGGCCGCCCTGGGTTCCGTGCCGCGCTCCAT CGAAGACCCCATCCTGGCCAACGAAAGCAACATTTCGGGCTTCGTGAACATGATGGTGGCCGCCCGCGACGCCAAGGTGA AAACCTTCGTCTACGCCGCGTCCAGTTCCACCTACGGCGACGAACCCACCCTGCCCAAGGTCGAGGACAAGATCGGCAAG CCGCTGTCGCCCTACGCGGTGACCAAGTACGTCAACGAACTGTACGCCGACGTGTTTGCCACCTGCTACGGCATGAAGGC CATCGGCCTGCGCTACTTCAACGTGTTCGGCAAGCGGCAGGATCCCTTTGGCGCCTATGCCGCCGTCATTCCGCAGTGGT TCGCCTCGCTGCTGCGCGGCGAGACCGTGTTCATCAACGGCGACGGCGAGACCAGCCGCGACTTCTGCTACATCGACAAC TGCGTGCAGGCCAACCTGCTGGCCGCCACCGCCACCGACGAGGCGGCCCTGAACACGGTGTACAACGTGGCCTTTGGCGA ACGCACCGACCTGAACCAGCTGTTCGACCTGATCCGCGAGGAAGTGAGCCGCCACAAGCCGGAAGCGGCCACGGCCAAGC CCGAGCACCGCGAATTCCGTTTCGGCGACGTGCGCCATTCCTTGGCCGACATCAGCCGCGCCCACACCCGGTTGGGCTAC GAGCCGGTGTACAGCGTGCGCCAGGGGCTGCGCCTGTCAGGCGACTGGTACGCCGCCAACCTGAAGTAG Protein sequence : MTRYTALMQELEAAPRTWLVTGVAGFIGSNLLETLLMHGQKVVGLDNFATGYQRNLDMVREIVGADLWRNFRFKEGDIRN LEHCREVCEGVDHVLHQAALGSVPRSIEDPILANESNISGFVNMMVAARDAKVKTFVYAASSSTYGDEPTLPKVEDKIGK PLSPYAVTKYVNELYADVFATCYGMKAIGLRYFNVFGKRQDPFGAYAAVIPQWFASLLRGETVFINGDGETSRDFCYIDN CVQANLLAATATDEAALNTVYNVAFGERTDLNQLFDLIREEVSRHKPEAATAKPEHREFRFGDVRHSLADISRAHTRLGY EPVYSVRQGLRLSGDWYAANLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 3e-97 | 61 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 3e-97 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DvMF_2280 | YP_002436690.1 | NAD-dependent epimerase/dehydratase | VFG0430 | Protein | 1e-97 | 61 |
