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Name : DvMF_2224 (DvMF_2224) Accession : YP_002436635.1 Strain : Desulfovibrio vulgaris Miyazaki F Genome accession: NC_011769 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2785206 - 2786483 bp Length : 1278 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATCTCAAGCTGCTGCAACGCAGCCCCGAAGTGGTGGCCAAGGCCTTGGCCGATCGGGGCTCGTCGCTCGACAT GGCCGAATTCACCGCCCTGGACGAACGCCGCCGCGCCCTTCTGGCCGAAGTGGAAGCCCTGAAGGGCGAACGCAACAAGG CCTCGGGCGAAGTGGCCCGCATGAAGCGCGCGGGCGAAGACGCCGCGCCGCTGCTGGAACGCCTGTCCGGGCTGTCCGAC CGCATCAAGGACCTGGACCGCGAAACCGAAGAGGTGAAGGCCGCCGTCAACGACTGGCTGCTGGCCGTGCCCAACATTCC CGATGCCTCGGTGCCCTTTGGCCGCAGCGAAGCCGACAACCCCGAGGTGCTGCGCTGGGGCGAGCCCCGCGCCTTCTCCT TTGCCCCCAAGGAACACTGGGAGATCGGCACCGCCCTTGGCGGGCTGGACTTCGAGCGGGCGGGCAAGCTGGCGGGCAGC CGCTTTGCCGTGTACCGCACCTGGGCCGCCCGCATGGAACGTGCTCTCGCCAACTTTTTTCTGGATACGCACGTCACCGA GCACGGCTACGTGGAAATCATTCCGCCGTTCATGGTCAATCGCAAGACCATGACCGGCACCGGCCAGCTGCCAAAATTCG AGGAAGACCTGTTCAAGCTCGAAGGGTGGGATTACTTTCTGATTCCCACTGCGGAAGTGCCGCTGACCAACCTGCACGCG GACGACGTGCTGGAAGAGGCGCAACTGCCCATGGGCTACGCGGCCATGACCCCGTGCTTCCGTTCCGAGGCGGGCAGCTA CGGCAAGGACACGCGCGGCCTGATCCGCCAGCACCAGTTCACCAAGGTGGAAATGGTGCGCTTCGCCCATCCGGAACGGT CGTTCGACGAACTGGAAAAGATGCGCGGCCATGCGGAAGTGCTGTTGCAGCGCCTGGGCCTGCCCTACCGGGTGATCACC CTGTGCACGGGCGACATGGGCTTCTCGTCTGCCAAGACCTACGACATCGAGGTCTGGCTGCCCGGCCAGAACGCCTACCG CGAGATTTCGTCCTGCTCCAACTGCGGCGACTTCCAGGCGCGCCGCGCGGGCATCCGCTTCCGCCCGGCGGGCGGCGGCA AGCCCGAATTCGCGCACACCCTGAACGGCTCGGGCCTGGCCGTTGGCCGAGCCCTGGTGGCGGTCATCGAAAACTACCAG CAGGAAGACGGGTCGGTGGTCATCCCCGAAGTGCTGCGCCCCTACATGGGCGGCATGGAGCGGGTGACGGCGGAATAA Protein sequence : MLDLKLLQRSPEVVAKALADRGSSLDMAEFTALDERRRALLAEVEALKGERNKASGEVARMKRAGEDAAPLLERLSGLSD RIKDLDRETEEVKAAVNDWLLAVPNIPDASVPFGRSEADNPEVLRWGEPRAFSFAPKEHWEIGTALGGLDFERAGKLAGS RFAVYRTWAARMERALANFFLDTHVTEHGYVEIIPPFMVNRKTMTGTGQLPKFEEDLFKLEGWDYFLIPTAEVPLTNLHA DDVLEEAQLPMGYAAMTPCFRSEAGSYGKDTRGLIRQHQFTKVEMVRFAHPERSFDELEKMRGHAEVLLQRLGLPYRVIT LCTGDMGFSSAKTYDIEVWLPGQNAYREISSCSNCGDFQARRAGIRFRPAGGGKPEFAHTLNGSGLAVGRALVAVIENYQ QEDGSVVIPEVLRPYMGGMERVTAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-117 | 57 |
