Gene Information

Name : DvMF_2095 (DvMF_2095)
Accession : YP_002436506.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2611155 - 2612570 bp
Length : 1416 bp
Strand : +
Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: dde:Dde_0879 two component Fis family transcriptional r

DNA sequence : 
ATGAGCCCCGCATCAATCCCGTGTTGCGGCAGCGTGCTGGTGGTGGACGACGAACGTGTGTTCGCCGTGGGCCTGGCGCG
CCTGCTGTCCACCCAGTTTCCGGACTGGACCTTCGACGTGCGATGCAGCGGAGAGGAGGCCCTTTCCGCGCTGGTCCACG
GCGACTATGCCGTGCTGATCACCGACCTGCGCATGCCCGGCCTGTCCGGCCAAACCCTGATGCGGGAAGCCCTGGCCCAG
GACCCCGCGCTGACGGTGATCATGCTCACCGCCTTCGGCTCCGTGGAAACGGCGGTGGCCGCGCTGAAGCAGGGGGCCTA
CGACTTTCTGACCAAGCCCATCGACCAGGAACACCTGTTCCGGGTGGTGGGCAAGGCCATGGAGCGCGGCGTGCTGCTGC
GCGAAAACGGCCGCCTGCGCCAGAAGGCCGCCGACGGCGACCTCGGCCCCATGCTCATCGGCAAGAGCCCGGCCATGCAG
CGGCTGCGCAAGTCCATCGCGGCGGTGGCCGCGTCGGACTACACGGTGCTCATCCGGGGCGAATCGGGCACCGGCAAGGA
ACTGGTGGCCCGGGCCGTGCAGTCGCTCAGCCAGCGGGCCGACGGGCCGTTCATCATGGTCAACTGCCCGGCCATTCCGG
ATGCGCTGCTGGAAAGCGAGCTGTTCGGCCACGTGAAGGGGGCCTTCACCGGCGCGGACAGGAACCGCAAGGGCCTGTTC
ATGGCGGCGGACAAGGGCACCATCCTGCTGGACGAAATAGGGGACATTCCGGCCTCTGTGCAGAGCAAGCTCTTGCGGGT
GATCCAGGAGGGCGAGGTGCGCCCCGTGGGCACCAACGAGGCCCAGCGGGTCAACGTGCGCATCGTGGCCTCCACCAACC
GTAACCTGGAAGCCAAGATCGCCGACGGCAGCTTTCGCGAGGACCTGTACTTCCGGCTCAACGTGCTGACCATCAACGTG
CCCCCGCTGCGCGAGCGCATCGAGGACATTCCCCACATCGCCTCCCACTTCCTGTTCCGGGTGTGCAACGAACTGGGCGT
GCCGGAAAAGGAATTCTCCAACGAGGCGCTGTCCTACCTTTCGTGCCGCCCGTGGCCGGGCAACGTGCGCGAACTGCTGA
ACCTGGTGCGGCGCATGGCCGTGTTCTGCCCCGGCGAGCGCATCGAGGGGGCCTTCATCCACCGCATGGAACACGGCGCC
GACACGGAACCGGAATGCGGGGCGGGCTTTTCGCCCTACAAGGACGCCAAGCAGGTGGCCGTGGACGAATTTACCCGCAG
CTACGTGCACCGGCTGCTGGAGCATACCCACGGCAACATTTCCGAGGCCGCGCGCCTCAGCGGGGTGGAACGGTTCACCC
TGCAGAAGATCCTGAAACGCATGCACATCGACACGGCGGACTACCGCAGGGGGTAG

Protein sequence : 
MSPASIPCCGSVLVVDDERVFAVGLARLLSTQFPDWTFDVRCSGEEALSALVHGDYAVLITDLRMPGLSGQTLMREALAQ
DPALTVIMLTAFGSVETAVAALKQGAYDFLTKPIDQEHLFRVVGKAMERGVLLRENGRLRQKAADGDLGPMLIGKSPAMQ
RLRKSIAAVAASDYTVLIRGESGTGKELVARAVQSLSQRADGPFIMVNCPAIPDALLESELFGHVKGAFTGADRNRKGLF
MAADKGTILLDEIGDIPASVQSKLLRVIQEGEVRPVGTNEAQRVNVRIVASTNRNLEAKIADGSFREDLYFRLNVLTINV
PPLRERIEDIPHIASHFLFRVCNELGVPEKEFSNEALSYLSCRPWPGNVRELLNLVRRMAVFCPGERIEGAFIHRMEHGA
DTEPECGAGFSPYKDAKQVAVDEFTRSYVHRLLEHTHGNISEAARLSGVERFTLQKILKRMHIDTADYRRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-68 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-68 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DvMF_2095 YP_002436506.1 Fis family transcriptional regulator BAC0467 Protein 2e-73 42
DvMF_2095 YP_002436506.1 Fis family transcriptional regulator BAC0089 Protein 1e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DvMF_2095 YP_002436506.1 Fis family transcriptional regulator VFG0116 Protein 4e-54 44
DvMF_2095 YP_002436506.1 Fis family transcriptional regulator VFG1249 Protein 7e-61 41