Gene Information

Name : DvMF_2066 (DvMF_2066)
Accession : YP_002436477.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Resistance
Product : ATPase P
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 2561057 - 2563573 bp
Length : 2517 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: sfu:Sfum_3773 heavy metal trans

DNA sequence :
ATGACCGCCTTTCGCATCGAGGAAATGGACTGCGCCAACGAAGTGACCGTCCTGCGGCACGCGCTGACCCCGCTGGTGGG
CAACCCCGACCGGCTGCAATTCGACGTGCTGTCCCGCCGCATGCGCGTGGACATGGACGGCCTGGACCTGCGCCCCGACG
ACGTGGTGGCCGCCGTGGCCCGCACCGGCATGCGCGCCGCGCCCGAAGCGGCAGGCAGGCCCGGCGTGGTGCTGGGCCCG
TTGCCGTCGGCCAGCCACGCCTGCACGGACGGATGTTGCCAACCCCATCAGGCAGGCCCCATCGGCCATGCAGGGCATGG
CCATGACGGCTGCTGCGGTTCCGCTCATGCCCCTGTTCATGCCTCCGCGTCTGCCTCCGCCTCCGCGCATGCGCATGCCA
TGCCCCCCCGCCCCGCGCAGATTCCGGCCCTGGCCGGGTGCCCGTGCTGCGGCGGCGCGTGCGATGTCCCAGCCCCCGGC
GACGCGCCTTCCGGCCTGTTGTCCCTGTTGCCGTCCGGCCTGACCGCGTTGTGGCAACGCCAGTCCTCGCTGCTGCTGTG
CAGCCTGAGCGGCGTGGCCCTTGTGGCGGGCATCGGCGTGGAATGGGCGCGCACCGGCTCGCTGCTGGAAGTGTTCGCGG
AATCGGGCGTACCCCATGCGGCCACGCTGGTTCTGTGGCTGGCGGCGGCGGTGGCGGGCGCCTGGCGGGTGCTGCCGCGC
GCGGTGCATGCCGTGCGCAGCCTGCGCCCCGACATGAACCTGCTGATGGTCACGGCGGTCATCGGCGCGGCGGCCATCGG
CCAGTTCTTCGAGGGGGCCTCGGTGGCGTTCCTGTTCGCCGTGGCCAACCAGCTGGAATCGTGGAGCGTGGACCGGGCGC
GCTCGGCCATTGCCGCGCTGCTGGACATTTCGCCCTCGCGGGCCTTGCTGCTGTCGCGTCCCGGTGACGTTGGGGGTGAC
GTGGTGGCGGGCATGGGCGGCGCCCTGACCGGCACCCCCGTGGAGACCGCCGTGGAAAACGTGCCCGTGGGTTCGCGCAT
TCTCATCCGCGCGGGTGACCGCGTGCCCCTGGACGGTACGGTGGCGGCGGGCAGCTCGGACATCGACCAGTCGCCCATCA
CCGGCGAATCCATGCCCGTGCCCAAGCGGGCGGGCGAGCCGGTCTACGCGGGCACCATCAACGGCGGCGGCGTGCTGGAG
GTGCTGACCACCCGCGCCGCGTCGGACACCACCCTCGCGCGCATCCTGCACATGGTGGAGGCGGCCCAGTCGCGCCGCGC
CCGCGCCGTGCAGTGGGTGGACCGCTTCGCCGCCGTGTACACCCCGGCCATGCTGGCCGTGGCCGCGCTGGTGGCCGTGG
TGCCGCCGCTGTTCTTCGGCGGGGCATGGTCGGCCTGGGTGTACGAGGCGCTGGTGGTGCTGGTCATCGCCTGCCCGTGC
GCGCTGGTCATTTCCACGCCCGTGTCCATCGTGGCCGGGCTGACCAGCGCGGCCCGCAACGGCGTGCTGGTCAAGGGCGG
CTCGTTCCTCGAACTGCCCGCCAGCCTCACCGCCGTGGCTTTCGACAAGACCGGCACCCTGACCCAGGGCCGCCCCCGCG
TGGCCCGCGTGCTGCCCGTGGACGGCCACCCGCAGGTGCGGGACGCGGCATCCGCATTGCGCATTGCCGCCGCGCTGGAA
GGCCCCAGCAGCCACCCCTTGGCGCGCGCCATCGTGCAGCATGCCCGGCAGGTGCCGGGGGCCGGGCTGGATGATGGCGC
CACGGCCAGCGACCATCGCACCCTGCCCGGTCTGGGGGCCGAGGGCGTGGTGGACGGCGCGCGCTGGCGCATCGGCAACC
GCCGCTATTTCGCGCAGGACGGGCCGCAGCACGGGCCGTCCGGCGGCGCGGAGAGCATCGGCACGGACGCCGCCGCCGCC
GGGTCTTCCGTGCTGCTGTGGAACGATGCGGGCCTTGCCGCCGTCATGGAACTGGAAGACGACCTGCGCCCCGACGCCCG
CGCCGTGCTGGACGATCTGCGCGCCGCCGGGCTGCACCGGATGGTCATGCTGACCGGCGACAACGCCGCCACCGCCGCCC
GCGTGGCCGCCGCCTGCGGCGTGACCGACATCCGGGCCGACCTTCTGCCCGCCGACAAGACCGCCGCCGTGGCCGCGCTG
GTGGCCGAAGGCGAACGGGTGGCCATGGTGGGCGACGGTGTCAACGACGCGCCCGCGCTGGCCACCGCGCACCTTGGCAT
CGCCATGGGCGGCATCGGCAGCGACGCGGCCATCGAAACCGCCGACATCACCCTGATGTCCGACGACCTCGGCAAGCTGC
CGTGGCTGGTGCGCCATTCGCGCCGCACGCTGGGCGTCATCCGGCAGAACATCGGCTTTGCCCTGGGGCTTAAGGCGCTG
TTTCTGGGGCTTGCCGTGTTTCAGGTGGCCAGCCTGTGGATGGCCATCGTGGCCGACATCGGCGGCTCGTTCCTGGTGAT
CATGAACGGCCTGCGCCTGCTGCGCCCCAAGGCGTAG

Protein sequence :
MTAFRIEEMDCANEVTVLRHALTPLVGNPDRLQFDVLSRRMRVDMDGLDLRPDDVVAAVARTGMRAAPEAAGRPGVVLGP
LPSASHACTDGCCQPHQAGPIGHAGHGHDGCCGSAHAPVHASASASASAHAHAMPPRPAQIPALAGCPCCGGACDVPAPG
DAPSGLLSLLPSGLTALWQRQSSLLLCSLSGVALVAGIGVEWARTGSLLEVFAESGVPHAATLVLWLAAAVAGAWRVLPR
AVHAVRSLRPDMNLLMVTAVIGAAAIGQFFEGASVAFLFAVANQLESWSVDRARSAIAALLDISPSRALLLSRPGDVGGD
VVAGMGGALTGTPVETAVENVPVGSRILIRAGDRVPLDGTVAAGSSDIDQSPITGESMPVPKRAGEPVYAGTINGGGVLE
VLTTRAASDTTLARILHMVEAAQSRRARAVQWVDRFAAVYTPAMLAVAALVAVVPPLFFGGAWSAWVYEALVVLVIACPC
ALVISTPVSIVAGLTSAARNGVLVKGGSFLELPASLTAVAFDKTGTLTQGRPRVARVLPVDGHPQVRDAASALRIAAALE
GPSSHPLARAIVQHARQVPGAGLDDGATASDHRTLPGLGAEGVVDGARWRIGNRRYFAQDGPQHGPSGGAESIGTDAAAA
GSSVLLWNDAGLAAVMELEDDLRPDARAVLDDLRAAGLHRMVMLTGDNAATAARVAAACGVTDIRADLLPADKTAAVAAL
VAEGERVAMVGDGVNDAPALATAHLGIAMGGIGSDAAIETADITLMSDDLGKLPWLVRHSRRTLGVIRQNIGFALGLKAL
FLGLAVFQVASLWMAIVADIGGSFLVIMNGLRLLRPKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-90 44
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-90 44
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 3e-87 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DvMF_2066 YP_002436477.1 ATPase P BAC0298 Protein 3e-76 46