Gene Information

Name : DvMF_1959 (DvMF_1959)
Accession : YP_002436370.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Unknown
Product : spermidine/putrescine ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 2420656 - 2421624 bp
Length : 969 bp
Strand : -
Note : PFAM: binding-protein-dependent transporters inner membrane component; KEGG: lip:LI0830 ABC-type spermidine/putrescine transport system, permease I

DNA sequence : 
ATGACGCAGCGTAGACCCTTCCGCACCGCCAGCATCGCCGTGGTCTGGTTGTGGCTGGGGCTGTTCGCCCTGTTGCCCAA
CCTCGGCCTGCTGCTGGTCACCTTTCTGGAGCGGGGCGAGTCGGACTTCGTGAGCCTGGTGTTCACGTGGGACAACTACG
CCCGCCTCGCCGACCCGGTGTTCATCAGGATACTGGGCGAATCGCTGTGGCTGGCCGCCGCCAGCACCCTGGTGTGCCTG
CTGATCGGCTACCCGTTCGCCTATGCCGTGGCCACGGCCCGGCGCGGGCTGCGCCCGTGGCTGCTGCTGCTGGTGGTCAT
TCCGTTCTGGACCAACTCGCTCATCCGCACCTACGCGCTGATCATCATCCTGAAATCGCAGGGCATTGCCTCCAACGTGC
TGATGGCCCTGGGTCTGGTCAGCGAGCCGGTGTCGTTCATGTACGGCGAGTTCGCCGTGTTCACCGGGCTTACCTACACG
CTGCTGCCGTTCATGATCCTGCCGCTGTACGCGTCCATAGAAAAGCTGGACAAGCGGCTGCTGGACGCGGCCAAGGACCT
GGGGGCCAGCAGCCTGCGGGCCTTCTGGCACGTCACCCTGCCGCTGACCCTGCCGGGCATCGTGGCCGGGTGCATGCTGG
TGTTCCTGCCCTCGCTGGGGTGTTTCTACATTCCGGAAATCCTGGGCGGGGCCAAGAGCATGCTCATCGGCAACTTCATC
AAGAACCAGTTCCTGGTGGCGCGCGACTGGCCGCTGGGCGCCGCCGCCAGCACCATCCTGACCGTGCTGCTGGTGCTGAT
GATCATCGGCTACTGGCTCAGCAGCCGCCGGGTGGCCCTGCGCGAACGCAAGGGCGCGGACACCGGGGCTGCCACCGCGG
GCCGCACGCCCGATGCGGCGCAGACAGACGGCGACGACGGCATGACGCCCGGCGCGCATGGCGCACAGGGCGCGCGGGGG
AGGGCGTAG

Protein sequence : 
MTQRRPFRTASIAVVWLWLGLFALLPNLGLLLVTFLERGESDFVSLVFTWDNYARLADPVFIRILGESLWLAAASTLVCL
LIGYPFAYAVATARRGLRPWLLLLVVIPFWTNSLIRTYALIIILKSQGIASNVLMALGLVSEPVSFMYGEFAVFTGLTYT
LLPFMILPLYASIEKLDKRLLDAAKDLGASSLRAFWHVTLPLTLPGIVAGCMLVFLPSLGCFYIPEILGGAKSMLIGNFI
KNQFLVARDWPLGAAASTILTVLLVLMIIGYWLSSRRVALRERKGADTGAATAGRTPDAAQTDGDDGMTPGAHGAQGARG
RA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 1e-50 52