Gene Information

Name : DvMF_1629 (DvMF_1629)
Accession : YP_002436045.1
Strain : Desulfovibrio vulgaris Miyazaki F
Genome accession: NC_011769
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2008369 - 2009316 bp
Length : 948 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mca:MCA1809 ABC transporter ATP-binding protein

DNA sequence : 
ATGGATATTGCGGCCCGCGCTTCCACTCCGCCCGACATGCATTACGGACCCGGCATGCACCACGGGCCCGGCATGTCTGG
CGACCCCGCCGTGGTCTGCGCCGGGCTGCGCAAGCGCTACGGCGAAGGGGCCGCCGCCGTGCACGCCCTGCGCGGCGTGG
ACCTGACCGTGCAACGCGGCGAACTGCTCATGCTGGTGGGTCCCTCCGGCTGCGGCAAGACCACGCTCATTTCGGTCATG
GCGGGCATCCTCGACCCCACGGAGGGCAGCTGCCGCATCCTGGGGCAGGACATGGCCGCCCTGGCCCCCCGGCCCCGCGC
GGCCTTTCGCGCCCGGAACATCGGCTTCGTGTTCCAGGCCTACAATCTCAATCCGGCCCTGACGGCGGCGGAGAACGTCT
CCGTGCCGCTGCGCATCTGCGGCGCGCCGCCGCGCGAGGCCATGCGCAAGGCCGAAGCCGCGCTGGACCTGGTGGGGCTG
GGCGACAAGGCGGAATCCGCCCCCGGCGACCTTTCCGGCGGGCAGCAGCAGCGGGTAGCCATTGCCCGCGCCCTGGTGCA
CCAGCCGCAACTGATCGTCTGCGACGAGCCCACCAGCGCCCTGGATCACGCCAACGGGCAGCGGGTCATGGAACTGCTGC
GCCGGGTGGGCACCGTGGATGGCCGGGCGCTGGTCATCGTCACCCACGATGCCCGCATCTTCGAGTTTGCCGACCGCATC
GCCGAACTGGACGACGGCCGGGTGACCCGCGTGGGTACGCCCGGCGCCCTGTCCGCGCCGTCGGGCGTGCCGGTGGCGGC
GGACATGCCCGGCGACGCCCCCGGCGACGCCCCCGGCGCGAAACCCGATCCGGCCTGCGCCAAAGCGTGGTCACCCGAAT
GCGCAACCCCGCCCGGCGGCAATGCCACGGGCACGCCCGCGCGGATGCCTGGTCGCCGCGCGGACTGA

Protein sequence : 
MDIAARASTPPDMHYGPGMHHGPGMSGDPAVVCAGLRKRYGEGAAAVHALRGVDLTVQRGELLMLVGPSGCGKTTLISVM
AGILDPTEGSCRILGQDMAALAPRPRAAFRARNIGFVFQAYNLNPALTAAENVSVPLRICGAPPREAMRKAEAALDLVGL
GDKAESAPGDLSGGQQQRVAIARALVHQPQLIVCDEPTSALDHANGQRVMELLRRVGTVDGRALVIVTHDARIFEFADRI
AELDDGRVTRVGTPGALSAPSGVPVAADMPGDAPGDAPGAKPDPACAKAWSPECATPPGGNATGTPARMPGRRAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DvMF_1629 YP_002436045.1 ABC transporter NC_008702.1.4606598. Protein 2e-31 41