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Name : DvMF_1434 (DvMF_1434) Accession : YP_002435850.1 Strain : Desulfovibrio vulgaris Miyazaki F Genome accession: NC_011769 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 1755813 - 1757306 bp Length : 1494 bp Strand : - Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: dde:Dde_2973 DNA-directed DNA polymerase DNA sequence : ATGCCAGCCCCCGCACATCTTCCCTTCAGGCAGGTTTCGCCCGCCGCCGCTTCGCCGACATCTCCCGGGCTCTGCTGTCC CGCCAGTCCTGCTGGTCCCGCCAGTTTCGCTGATCACGCCGATTCGGCCAGTCCCGCCAGCCCGTCCAACGCCCCCGGCT CGCCCGGCCCGCTCCTTCAGCCGTGGGCGCTGGTGGACTGCAACAACTTCTACGCCTCGTGCGAGCGGCTGTTCCGGCCC GACCTGCGCGGCAAGCCCATCGTGGTGCTGTCCAACAACGACGGGTGCATCATTTCGCGCTCGGACGAGGCCAAGGCCCT GGGCGTGGAGATGGGCGCCCCGGCCTTCAAGGTGCGGCGCGAACTGGCCCGGCTGGGGGTGCACGTCTTTTCCTCCAACT ATGCCCTGTACGGCGACCTTTCCAGCCGGGTCATGCGCACCCTGGGCACCCTGTCCCCCGAGGTGGATGTGTATTCCATC GACGAGGCCTTTCTGCCCCTGCGCGGCCCACTGGCCGCCGACCCCGTGGCGGTGGGCCGCGCCCTGCGCGAACGGGTGGC GCGCTGGACCGGCATTCCCATTTCCGTGGGCATTGCCCCCACGCGCACCCTGGCCAAGATCGCCGGGCGGGTGGCCAAGC GCACCCCGCGATGTGAAGGCGTGTTCGACCTGGCCCGCAGCCGCGAGGTGCTGGGCATGAGCGTGGACGATCTGCTGGGT TCGCTGCCCGTGGAGTCGGTGTGGGGCGTGGGGCGGCGGCTGGCGGGCATGCTGCGCGGCGCGGGCATCGCCACGGCCCG TGCGCTGCGCGATGCGGGAGATGACTGGGTGCGGCGGCGCATGAGCGTCACCGGGTTGCGCACCGTGCTGGAACTGCGCG GCCTGCCGTGCATAGGGGCAGAGGAACAGGGCGAACCGCCCTCGCCGCGCCACACGGTGGTCTCCTCGCGCTCGTTCGCC GGGCGCATCGCCGACGTGGCCATGCTGCGCGAGGCGTTGGCCACCCACGCCGCCCTGGCCGGGGCCAAGCTGCGCCGGGC CGGGCTGGTGGCCGGGGGACTGGCCGTGCACGTGCGCACCGCCCGCCACGACGAACAGGCGGCCCTGCGTTGCGACGACA GCGTGGCCCTGCCCCTGCCGGTGCCCACGGCGGACAGCGCGGTGTTCATCCGGCTGGCGCATGAAGGACTCGACCGCGTC TTTCGTCCGGGGTATCCCTACGCCAAGGCCGGGGTGATGCTGTACGGCCTGGAACGGGCCGACACCCGGCAGGGCAGCCT GCTGGCCCTGGCCGACGGCACGGCGGAACGCGACGCCGCGCGCGAGCGGCTGATGGCCGTGGCCGACCGGATCAACGCCC GGTACGGTCGCGGCAAGCTGCGCCACGCGGCGGAAGGGCTGGACGCCGAGGCCCCCTGGCACATGCGCCAGAAGCACCGT TCGCCCCGCCGCACCACGGCGTGGGACGAACTGGCCGAGGCGCTGTGCGAATAG Protein sequence : MPAPAHLPFRQVSPAAASPTSPGLCCPASPAGPASFADHADSASPASPSNAPGSPGPLLQPWALVDCNNFYASCERLFRP DLRGKPIVVLSNNDGCIISRSDEAKALGVEMGAPAFKVRRELARLGVHVFSSNYALYGDLSSRVMRTLGTLSPEVDVYSI DEAFLPLRGPLAADPVAVGRALRERVARWTGIPISVGIAPTRTLAKIAGRVAKRTPRCEGVFDLARSREVLGMSVDDLLG SLPVESVWGVGRRLAGMLRGAGIATARALRDAGDDWVRRRMSVTGLRTVLELRGLPCIGAEEQGEPPSPRHTVVSSRSFA GRIADVAMLREALATHAALAGAKLRRAGLVAGGLAVHVRTARHDEQAALRCDDSVALPLPVPTADSAVFIRLAHEGLDRV FRPGYPYAKAGVMLYGLERADTRQGSLLALADGTAERDAARERLMAVADRINARYGRGKLRHAAEGLDAEAPWHMRQKHR SPRRTTAWDELAEALCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 8e-50 | 42 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 8e-50 | 42 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-55 | 41 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-41 | 41 |
