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Name : DvMF_1353 (DvMF_1353) Accession : YP_002435770.1 Strain : Desulfovibrio vulgaris Miyazaki F Genome accession: NC_011769 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1650157 - 1651509 bp Length : 1353 bp Strand : + Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: dde:Dde_1409 primary replicative DNA helicase DNA sequence : TTGCGCCGAGTCCCCCCGCACAGCACCGAAGCCGAACAGGCCGTGCTCGGGGGGATTCTGCTTCGCAACTCCGTGCTGCA TTCCGTGGTCGACACGCTGCGCCCGGAAGACTTCTACCTGCCCGCCCACCAGCAGATCTACGACGCGTGCCTGGAACTGT ACCGGCGCAACGCCCCCATCGACCTCGTGACCATGGCGGAATACCTGCAATCGCAGAGCCGCCTGGAAGGGGTGGGCGGG GCCGTGTACCTGGCGGAACTGGCCCAGTCCACCATCAGCGCCGCCAACGCAGAGCACTATTCCACCATCGTGCGCGACAA GTCGCTGTTGCGTTCGCTGATCGGCGCGGGTTCCGAGATCATCAGCAACTGCTACGACGCCTCGCGCGAGGTGCAGAAGC TGCTGGACGAATCGGAGCAGGCGGTGTTCGCCATTTCCGAGCGGGTCAGCGGCAAGATGTTCCGCAGCGCCAAGGAACTG GTGAACAAGGTTTTCGAAGACCTTGTGAAGCGCTGCGACCGCAAGGAAGTGGTCACCGGCGTCACCACCGGCTTCGTGCA ACTGGACCAGATGACCTCGGGTCTGCAACCGTCGGACCTGATCATCGTGGCTGCGCGCCCCTCCATGGGCAAGACCGCCT TCGCCCTGAACATGTGCCTGCGCGCCGCCGTGAACCAGAACGTGCCGGTGGCCGTGTACTCCCTGGAAATGTCCATGGAG CAGCTGGTCATGCGCATGCTCTGCTCGCTGGGCAAGGTGGACCTGTCCAAGGTGCGCAAGGGCTTCCTGGACGACGAGGA CTGGCAACGCCTGTACCACGCCGCCGACGTGCTGTCGCAGGCGCCCATCTACATCGACGACACGCCCGCCATCACCACCC TGGAACTGCGTGCCCGCACCCGCCGCCTGCGTGCCGAGCGCGGCGTGGGCCTGGTCATGGTGGACTACCTGCAGCTGATG CGTTCCGCCCGCCGCGTGGATTCGCGCGAACTGGAAATTTCGGAAATCTCGCGTTCGCTGAAGGCCCTGGCCAAGGAACT GACCATCCCGGTCATTGCCCTGTCGCAGCTGAACCGCAAGGTGGAAGAGCGCACCAACAAGCGCCCCATGCTTTCGGACT TGCGCGAATCGGGCGCCATCGAGCAGGACGCGGACGTGATCATGTTCATCTACCGCGATGATGCCTACAACAAGCGCGAC GACAACCCGCGCAAGGGCATCGCGGAAATCATCATCGGCAAGCAGCGCAACGGGCCCGTGGGCGTTGCCGAGCTTGCCTA CCTGGCCTCGCACACCGCGTTCGAGGATTTGACGTTCGTCCCGCCGCCGCCCTCCGAGGGGTACGGGGATTGA Protein sequence : MRRVPPHSTEAEQAVLGGILLRNSVLHSVVDTLRPEDFYLPAHQQIYDACLELYRRNAPIDLVTMAEYLQSQSRLEGVGG AVYLAELAQSTISAANAEHYSTIVRDKSLLRSLIGAGSEIISNCYDASREVQKLLDESEQAVFAISERVSGKMFRSAKEL VNKVFEDLVKRCDRKEVVTGVTTGFVQLDQMTSGLQPSDLIIVAARPSMGKTAFALNMCLRAAVNQNVPVAVYSLEMSME QLVMRMLCSLGKVDLSKVRKGFLDDEDWQRLYHAADVLSQAPIYIDDTPAITTLELRARTRRLRAERGVGLVMVDYLQLM RSARRVDSRELEISEISRSLKALAKELTIPVIALSQLNRKVEERTNKRPMLSDLRESGAIEQDADVIMFIYRDDAYNKRD DNPRKGIAEIIIGKQRNGPVGVAELAYLASHTAFEDLTFVPPPPSEGYGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-73 | 48 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 7e-68 | 46 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-72 | 46 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 7e-73 | 46 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 7e-68 | 45 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 5e-61 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 8e-61 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 8e-61 | 42 |
