Gene Information

Name : Dalk_0825 (Dalk_0825)
Accession : YP_002429998.1
Strain : Desulfatibacillum alkenivorans AK-01
Genome accession: NC_011768
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1108450 - 1109346 bp
Length : 897 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dol:Dole_1674 tyrosine recombinase XerD

DNA sequence :
ATGACCGAATCAAACATCCTAATCGACCAGTATATGAACTACCTCCTGGTGGAAAAAGGCCTGTCCCAAAACACCCTGGA
GGCCTACGGCAAAGACCTGGGCGTTTTCACCGACTTTCTCCAGAAAAGAAAGATTGACGACCTGACCAAGGCGGACACCC
CGGACATCGTCCAGCATTTGATCGATCTTCGCGCCCAGGGCCTGGGCGCTCGTACAAGGGCGCGGCATCTGGTGGCTATC
CGGGGCTTGTTTTCCTTTTTGGAGCAGGAAAAAATCATCAAACACAATCCAGCCAAGCTGGTGGATCTGCCTAAGACCGG
GCTGCATCTGCCGGACGTAATCTCCGTGGTGGAGATCGAGCAATTGCTGGAGGCGCCCAACGAGATGGATATCCTGGGGG
CGCGGGACAGGGCCATGATGGAGCTTGCCTACGCTTCGGGCCTGCGGGTGTCCGAACTGATCAATGTGAGAGTGCAGGAC
ATTCATCTGGATGCGGGATTCGTCCGGGTCATGGGGAAAGGCTCCAAGGAGCGCATTGTGCCCATGGGCAGGCAGGCCAG
GGAAAAGATAAAAACCTACATGGATCACGACCGGCCCATCCTGTTGAAAGGCAAGCCGGGCGAGTATTTGTTCGTGGTCC
GGGGAGGGCGGCCCATGACCCGTCAGGCCTTTTGGAAGCTATTGAAGAAGTACGCCCTAAAGGCCGGAATCGCCAAGAAT
ATCACGCCCCACACCTTGCGGCATTCCTTCGCCAGTCATTTGCTGGAAGGCGGCGCCGACCTGCGGGTGGTCCAGGAAAT
GCTTGGGCACGTTGACATTTCCACCACCCAGATATACACACACGTTGCAAGAGAGCGATTGATTGAAATTCACGAACGCT
ATCACCCCCGGCATTGA

Protein sequence :
MTESNILIDQYMNYLLVEKGLSQNTLEAYGKDLGVFTDFLQKRKIDDLTKADTPDIVQHLIDLRAQGLGARTRARHLVAI
RGLFSFLEQEKIIKHNPAKLVDLPKTGLHLPDVISVVEIEQLLEAPNEMDILGARDRAMMELAYASGLRVSELINVRVQD
IHLDAGFVRVMGKGSKERIVPMGRQAREKIKTYMDHDRPILLKGKPGEYLFVVRGGRPMTRQAFWKLLKKYALKAGIAKN
ITPHTLRHSFASHLLEGGADLRVVQEMLGHVDISTTQIYTHVARERLIEIHERYHPRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-59 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-59 45