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Name : Dalk_5144 (Dalk_5144) Accession : YP_002434282.1 Strain : Desulfatibacillum alkenivorans AK-01 Genome accession: NC_011768 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 6339166 - 6340902 bp Length : 1737 bp Strand : - Note : KEGG: dol:Dole_1042 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase DNA sequence : ATGCTCCCGTCACTGGATGAAATACTGATCAGAGACCACGGGCTGCCGCCGGAAGATCTGGAAGACGCAAGGCGGGTTTC CGCGGAAAAAGGCGTCTCCCTGGGCGACGTCCTGGCCCAAAAGAACCTGTTGCAGGAAAACGCCTGGCTTCAGGCCGTGG GTGAATATTACGGCCTGGAGGTGTGGAACGAACTGCCCATTGACGCGGGGCCGGCCGACTATACCCAGCAAACGCCCATC CAGTTTTTAAAAAAGCATAAAATGGTTCCCCTGTTTTTGGCCGAGGAATCCGAAGATGAACAAGAGCCGGATCAGGACGA GGAACGGGAGCGGCAGGTGTACGTGGCCGTGGCCGATCCTTCGGGCTTCGACGCGGTGGACGACCTGGCTGCCCTGTTGA ACGCGGGGCCTGTCACTACGATCCTGGCGCCCAGCGCCGCCATTACCTCCGCCATCAACATGGCCTACGACATGGCCCGG GACAGCGCCGAGCAATTGGTTGCGGACATGGAGGAAGGCGCGGACTCCATTATTTCGGAGATCGAAAAAACCGCCGACCT TCTGGAGGAAACCAGCGACGCGCCCATCATCAAACTGGTGAACCACATCCTGTCCCAGGCGGTCAAGGCCCGGGCCAGCG ATATCCATATCGAGCCCTATCAGACTATGCTCAAGGTGCGGTATCGCGTGGACGGCGTGCTGTACGATCTCATCAAGCCG CCCAAGCGCATTCAATCGGCATTGGTTTCCCGCATCAAGGTCATGGCCAAGCTGAATATCGCCGAAAAGCGGCTGCCCCA GGACGGCAGGATCGAAATCCGAATCGGCGACCGCAACGTGGACATCCGCGTGTCCACCATCCCCACCACATTCGGGGAGC GCATCGTCTTGCGTTTGCTGGACAAATCCACAACCATACTCAAACTGACGGACATCGGCTTCACCGGCGAACAGTTGAAA ACCATCCACGGCCTGATCCACCAGCCCTACGGAATCATATTGGTCACGGGCCCCACGGGCAGCGGCAAAACCACCAGCCT GTACGCGGTCCTTTCCACCATCAATACCGAGGACATCAATATCATCACCATTGAGGACCCGGTGGAATACCAGATTTCGG GCATCGGCCAGATTCAGGTCAATCCAAAAATCGACCTGACCTTCGCCCGCGGGCTTCGCTCCGTCGTGCGCCAGGATCCG GACGTTATTCTGATCGGAGAAATCCGCGATATGGAAACCGCAGAAATCGCCGTGCAGTCCTCCCTGACCGGCCACTTGGT TTTCTCCACCCTGCATACCAACGACTCGGCTAGCGCCATCACCCGTTTGATCGACATGAACGTGGAGCCTTTTCTCATTT CGTCATCGGTTCTGGCGGTCATGGCCCAGCGCCTGGTGCGGGTGCTTTGCCCCCATTGCAAGGAGCCCCACACGCCGGAC GAGGCCTCCATGGCTTTCCTCAAGATGACGCCCGAAGACCTGGCAAAGGGCCAGATATACAAGCCTGTGGGCTGCCCCGA ATGCCTGCAAACCGGGTACCATGGCCGGAAAGGCATCTTTGAGATCATGCCCATGGACCGCGACATTAAGTCCCTGCTTC TTACCGCCTCGGACGCTAACACCATCAAGGCCAAGGCGATTGAAAACGGCATGATCACCTTGCGGCAGGACGGCGTCAAC AAGGTGCTGGCGGGCATAACCTCCATCGAAGAAGTCTTCCGGGTGACTCAACAGTGA Protein sequence : MLPSLDEILIRDHGLPPEDLEDARRVSAEKGVSLGDVLAQKNLLQENAWLQAVGEYYGLEVWNELPIDAGPADYTQQTPI QFLKKHKMVPLFLAEESEDEQEPDQDEERERQVYVAVADPSGFDAVDDLAALLNAGPVTTILAPSAAITSAINMAYDMAR DSAEQLVADMEEGADSIISEIEKTADLLEETSDAPIIKLVNHILSQAVKARASDIHIEPYQTMLKVRYRVDGVLYDLIKP PKRIQSALVSRIKVMAKLNIAEKRLPQDGRIEIRIGDRNVDIRVSTIPTTFGERIVLRLLDKSTTILKLTDIGFTGEQLK TIHGLIHQPYGIILVTGPTGSGKTTSLYAVLSTINTEDINIITIEDPVEYQISGIGQIQVNPKIDLTFARGLRSVVRQDP DVILIGEIRDMETAEIAVQSSLTGHLVFSTLHTNDSASAITRLIDMNVEPFLISSSVLAVMAQRLVRVLCPHCKEPHTPD EASMAFLKMTPEDLAKGQIYKPVGCPECLQTGYHGRKGIFEIMPMDRDIKSLLLTASDANTIKAKAIENGMITLRQDGVN KVLAGITSIEEVFRVTQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-101 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-102 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dalk_5144 | YP_002434282.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-109 | 53 |
| Dalk_5144 | YP_002434282.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-102 | 51 |
| Dalk_5144 | YP_002434282.1 | general secretory pathway protein E | VFG1876 | Protein | 8e-101 | 51 |
| Dalk_5144 | YP_002434282.1 | general secretory pathway protein E | VFG0112 | Protein | 9e-85 | 41 |
