Gene Information

Name : Dalk_4859 (Dalk_4859)
Accession : YP_002434004.1
Strain : Desulfatibacillum alkenivorans AK-01
Genome accession: NC_011768
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6007330 - 6008073 bp
Length : 744 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: pca:Pcar_0366 ABC-type transport system, ATPase component PhnL

DNA sequence :
ATGGAAACCATATTGCTTAAAGACGCCCAAAAGATATTCACCCTGGGCGGGGAAAAGGTGCACGCCCTGGACGGGGTCTC
CCTGTCCATCATGCCCGGGGACTTTGTCGCGGTCATGGGCGCTTCAGGCTCCGGCAAGTCCACGCTCATGAACATTTTCG
GCTGCCTGGACACCCTGACTTCCGGGGAGTATCTTCTGGAAGGCCGAAATGTGAGCGGCATGGACAAAAAACATCTGGCG
GACATCCGCAATCAGCGCATCGGTTTTGTTTTCCAGGGCTTTAACCTCCTGCCCCGGACCAGCGCATTGGAAAACGTGCA
ACTGCCATTATTCTACAACCGCCATAAAAAAGGCCTGAATCCCAAAAAGCTGGCGGCCGAAGCCCTGGACAGGGTGGGCC
TGGCCAATCGCATGAGCCACGAGCCCAGCCAGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCAATCGCCCGGGCCCTGGTG
AACGACCCGGCCATCATCCTGGCGGACGAGCCCACGGGCAACCTGGACTCCAAGACCACCCTGGACGTCCTGACCTTGTT
CAAAGACCTCAACCAGCAGGGAATCACCATTGTGCTGGTCACCCACGAAGCGGACGTGGGCGAGCACGCCCAAAGGGTGA
TCGCCATGCGGGACGGCAAAGTGATCAGCGATGACTTGAACGCCGGGAGCAAGCCCCCAATCCAGGCTGCGCCGTCCCCG
GTCAGGCGGGAGGCGGTCTCATGA

Protein sequence :
METILLKDAQKIFTLGGEKVHALDGVSLSIMPGDFVAVMGASGSGKSTLMNIFGCLDTLTSGEYLLEGRNVSGMDKKHLA
DIRNQRIGFVFQGFNLLPRTSALENVQLPLFYNRHKKGLNPKKLAAEALDRVGLANRMSHEPSQLSGGQQQRVAIARALV
NDPAIILADEPTGNLDSKTTLDVLTLFKDLNQQGITIVLVTHEADVGEHAQRVIAMRDGKVISDDLNAGSKPPIQAAPSP
VRREAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-33 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dalk_4859 YP_002434004.1 ABC transporter NC_012469.1.7686878. Protein 6e-55 55
Dalk_4859 YP_002434004.1 ABC transporter NC_008702.1.4606598. Protein 1e-44 48
Dalk_4859 YP_002434004.1 ABC transporter CP001581.1.gene598.p Protein 1e-38 45
Dalk_4859 YP_002434004.1 ABC transporter CP001581.1.gene798.p Protein 6e-38 43
Dalk_4859 YP_002434004.1 ABC transporter NC_012469.1.7686946. Protein 2e-27 41
Dalk_4859 YP_002434004.1 ABC transporter NC_012469.1.7685735. Protein 7e-33 41