Gene Information

Name : Dalk_4010 (Dalk_4010)
Accession : YP_002433164.1
Strain : Desulfatibacillum alkenivorans AK-01
Genome accession: NC_011768
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 5042030 - 5042962 bp
Length : 933 bp
Strand : -
Note : KEGG: gme:Gmet_3234 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence :
ATGGCGGATCAAATCCTCATTAAAATAGGAACCCGGGGCAGCCCCCTTGCCCTGTGGCAGGCTGAGCATGTTGCAGCGCT
TCTGGAGCGCCGGAATCCCAACGTGAAGACCGAGCTGGTCGTCATCAAGACCAAGGGCGACAAAATTCTGGACGTGCCCC
TGGCCAAGGTGGGCGGCAAAGGCTTGTTCGTCAAGGAGATCGAAGAATCCCTTTTGGACGGCCGGACCGACATGGCCGTG
CATTCCATGAAGGACGTGCCTTCGGAATTTCCCCCTGGATTGTGTCTTGCTGCGATAATGGAGCGGGAGGACCCCCGGGA
CGCTTTGATTTGCTCCAGGGCCAAGGGACTCTTGGACCTGCCGCCCAACGCCAAGATCGGCACAAGCAGCCTGCGGCGTT
CGGCCCAGTTATTGGCCCTTATGCCGGATCTGCAAATTGAGCCTTTGCGCGGCAATATCGGCACCCGTCTGGACAAGCTC
ACGTCCCTGAACCTGGACGCCATTGTGCTTGCAGCCGCAGGCGTCAAACGCATGGCCATGGACGACAAGGTTTCGGAATA
CATTCCCGAGGAGACCGTGCTTCCGGCCGTGGGCCAGGGCGCCATGGGCATTGAAATCCGGGAGGACGATCCCGTGGCCG
GACCGCTGGCCAGAGCCTTGAACCACGAGCCGACCCAGGTGATCGTCACCGGCGAACGGGCTTTTTTGAAGCGTCTGGAC
GGCGGATGCCAGGTTCCCGTGGCAGCCCACGGCAGGCTAAAGGGAGACTTCCTGCAACTGACCGGCGTCATCGCCGGAGT
GGACGGGACCCCGATTTTCCGCGACAGCGTTTCCGGCAAAAAGGAAGACGCCAAGGAACTGGGGGTCAAACTGGCGGAGA
AGCTCCTGAACGCCGGCGGCAAGGCCGTACTGGACGAATTGCTGGATCATTAA

Protein sequence :
MADQILIKIGTRGSPLALWQAEHVAALLERRNPNVKTELVVIKTKGDKILDVPLAKVGGKGLFVKEIEESLLDGRTDMAV
HSMKDVPSEFPPGLCLAAIMEREDPRDALICSRAKGLLDLPPNAKIGTSSLRRSAQLLALMPDLQIEPLRGNIGTRLDKL
TSLNLDAIVLAAAGVKRMAMDDKVSEYIPEETVLPAVGQGAMGIEIREDDPVAGPLARALNHEPTQVIVTGERAFLKRLD
GGCQVPVAAHGRLKGDFLQLTGVIAGVDGTPIFRDSVSGKKEDAKELGVKLAEKLLNAGGKAVLDELLDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-64 52
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-64 52