Gene Information

Name : Dalk_3774 (Dalk_3774)
Accession : YP_002432929.1
Strain : Desulfatibacillum alkenivorans AK-01
Genome accession: NC_011768
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 4763127 - 4764524 bp
Length : 1398 bp
Strand : -
Note : KEGG: pth:PTH_2214 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta

DNA sequence :
ATGCCTTACACCAAAATTGTGGCCACCCTGGGGCCTGCCAGCGATTCGCCGGAGGTCATGAGGGCCTTGATTAAAAACGG
CATGAACGTAGCCAGGATCAACTTCGCCCACGGCACGCACGAGGAGCACGCCAAAAAAATTGCAGACCTCCGCGCCATTT
CCAGTGAACTGGGCATTCCCGTCGCCATCCTGCAAGACCTGGGAGGCCCCAAAATCCGGGTGGGCGACCTGCCGTCCGAA
GGCGTCAGCCTCAAGGTCGGGGACTTGTTCTGCCTGTATTCGGAAGAAGGCAAGGGCGATAAAAGAGGAGTTTCCGTAAC
CTATCCGGAGCTTCCCGACGAAGTGGAAACCGGCGACCCCATTTTGTTGGCCGACGGCCTTCTGGAACTGGAAGTGGTTG
ACGCCAGACCCACTTGCGTGGAATGCCGGGTGGTTACGGGCGGCGTCCTTACCTCACATAAAGGGATCAACCTGCCCACG
CGCACCTTAAAGACCTCCGCCCTGACGGAGAAGGACATCAAGGACCTGGATTTCGGCATGGACGAAGGCGTGGACTACGT
GGGCGTCTCCTTTGTCCGGTCCGCCGCGGACATCCGCATGGTCAAAGATCGGATGATCGGCCGCCAGGCGCCGGTCATCG
CCAAAATCGAGAAGCACGAGGCCATCGCCAATATAGACGAAATTCTTGAAGTGGCCGACGGAATCATGGTGGCCAGGGGC
GATTTGGGCGTGGAAGTCCCCCTGGAAGAAGTTCCCACTTACCAGAAAATACTGATCCGCAAGGCCAACGCCCTGGGCAA
GCCGGTCATCACCGCCACCCAGATGCTTCGGTCCATGGTGGATTCTCCGCGGCCAACCAGGGCGGAAGCCACGGACGTAG
CCAACGCGGTTCTGGACGGCACGGACGCGGTCATGCTTTCGGAGGAAACCGCCATGGGCGCCTACCCCATTGAAGCCGTG
CAATACATGGCCCGAATCGCCAAAAAGGCGGAGGAAACCTTTTCTTACGAACACCGCTTGAAGCAGCATCCGGAAAAAGA
CATGGCCGACTCCGTGGCCCATGCTTCCTGCGTTCTGGCCGAGCATTTGGGAGCCTCCGCCATCCTGGCGGCCACGGCAT
CCGGCCTGACCGCCAAGAAAATATCCCATTTCAGGCCCCAAAGAAAGATTGTGGCCTTATCTCCCAACGAGTCGACAGTG
CGGGAATTGTCCTTATATTGGGGATGTACGCCGGTGTTGGTGTCGTCGCCCAAAGACACGGACGCACTGATCAATTCATC
GGCCAGGGCGGCCTTGGACCATGGCCTGATTGCAAAAGGAGACCTTGTGGTAATCACCGCAGGGCATCCTATCGGAGGGG
CGGGCACGACCAATATGCTGAGGGTTATGCAGCTTTGA

Protein sequence :
MPYTKIVATLGPASDSPEVMRALIKNGMNVARINFAHGTHEEHAKKIADLRAISSELGIPVAILQDLGGPKIRVGDLPSE
GVSLKVGDLFCLYSEEGKGDKRGVSVTYPELPDEVETGDPILLADGLLELEVVDARPTCVECRVVTGGVLTSHKGINLPT
RTLKTSALTEKDIKDLDFGMDEGVDYVGVSFVRSAADIRMVKDRMIGRQAPVIAKIEKHEAIANIDEILEVADGIMVARG
DLGVEVPLEEVPTYQKILIRKANALGKPVITATQMLRSMVDSPRPTRAEATDVANAVLDGTDAVMLSEETAMGAYPIEAV
QYMARIAKKAEETFSYEHRLKQHPEKDMADSVAHASCVLAEHLGASAILAATASGLTAKKISHFRPQRKIVALSPNESTV
RELSLYWGCTPVLVSSPKDTDALINSSARAALDHGLIAKGDLVVITAGHPIGGAGTTNMLRVMQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-78 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 43
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 4e-70 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-78 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dalk_3774 YP_002432929.1 pyruvate kinase VFG0479 Protein 7e-79 43