Gene Information

Name : Dalk_3491 (Dalk_3491)
Accession : YP_002432647.1
Strain : Desulfatibacillum alkenivorans AK-01
Genome accession: NC_011768
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 4424602 - 4427511 bp
Length : 2910 bp
Strand : +
Note : PFAM: DNA primase small subunit; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: dsy:DSY4376 hypothetical protein

DNA sequence :
ATGAACTATTATGATCTCATAAAAAACTTTAAATCCCTGCTCGACGAAATAAACCGCCTAAAAATCGAAAATAGCCAGTT
GAGGGTCGAACTCGGGCTGAAGCCCCCACAATCGTTACAGGCATCACCTCTGGTTGTTCAAACAGAAACAATGGGCCATG
AGGATGAGTTGCGTGTTGAAAGCCAATCCTTTGCAGTCAATAACTCATCGGATTCTCCTACAAAAATTCGCCTTTTTATG
TCCTTGTTCAAAGGGCGTGAGGACGTCTTCGCCAAAAGATGGGAAAGCCGAAAGTCAGGTACGGGGGGATACGCCCCAGC
GTGTCTGAATCAATGGCGGCCGGGAATATGTGGAAAACCCAAATTACCTTGTTCAAAATGCAGCAACACATCCTATGCCG
AACTGAATGAAACAGTCATTGAAAGCCATTTGAGAGGCCATGCCGTCGTCGGCGTCTATCCAATGCTTCAGGATGAAACC
TGTCATTTCTTGGCCATGGATTTTGATAAGGCGAATTGGGAAAAAGATGTTGCCGCTGTTAGGGACGTATGCAGCGAGTA
CACGATTCCCATTGCGGTAGAGCGTTCAAGATCGGGAAAAGGAGGCCATGTCTGGTTTTTCTTCGAACATCCAGTCTCCG
CAGGTCTGGCGCGCAAATTCGGCGCGGCTCTTTTAACCCGCACTATGAACAAACGGCATGACCTCCCATTCGCATCCTAC
GATCGTTTGTTTCCCAGTCAGGATACCATGCCAAAGGGCGGTTTGGGAAATCTGATCGCCCTGCCATTGCAAAAAGCGGC
CAGGGAAAATGCCAACAGCGAATTCATTGATGAACATTTTCGATCGTATTCCGATCAATGGGCCTTTCTTTCCGCCATTG
AGAGGATGTCGCAAAACCGCATAGAATGTCTTATAACCGACCTTTCCCCGGGTGATGAACTTGGGGAACTGAAAATCGAT
GAAGAAGAAAGTAAACCTTGGGAAACTAAACAACCGCAAACAGTTCTTGAAAAAAGCGATTTCCCGGATAAGCTCGAGAT
CGTTAGGGGAAACATGCTATTTATTCCCAAGGAGGGAATGTCGCAACGCGCTTTGAACCGGTTAAAGCGGCTGGCAACGT
TTAAAAACCCGATGTTCTATAGACAACAGGCCATGCGTTTGCCCACCTATAATTATCCAAGGGTGATTTCATGCTCCGAT
GACACGCAAGGTTATCTGTGTCTACCCAGAGGATGTGAGCCAGACCTTGTATATGAAATCGAAAAATTGGATGTAAGCAT
CAAGATAATTGATAAAACTTACGCAGGAAAACGGATCAACGTGGAATTCAAAGGCCATTTGAGAGACGAACAGAATTTGG
CCCTCAGCCATCTTATTCAACACGACAATGGCATACTTTCGGGGACAACTGCCTTCGGCAAGACAGTAGTTGCCATCAAG
CTGATTGCCGAAAAAAAGACAAACACGCTAATACTGGTGGACAAAATTAGCCTGTTGACCCAATGGAAAAAGAGGCTATC
AGAATTCCTTGAGATCAACGAACCTTTGCCGGATGAGTCAAATGGGCGACGGAGGAAAAGACACATCATTGGTCAAATCG
GCGGCGGCAGGAATACTTCGTGCGGAGTTATTGATATTGCTGTCATGCAATCTCTTTCCAGGAAAGGGGAAGTGAAGGAG
ATCGTACGGGACTATGGCCTGATCATCGCTGATGAGTGCCATCATGCCTCCGCATTTACTTATGAACAAATTTTAAAAAA
GGCCCGCGCCAAGTATGTTTACGGCTTGAGCGCAACCCCTGTCAGGAAAGATGGGCATCAACCTATTCTGTTCATGCATT
GCGGTCCGATTCGATACCGGGACAACCCTAAAAGGCAGGCGGAGAGCAGACCCTTTGATCATTATGTTATCCCCCGGTTC
ACATCGTTGCGGACGCCCTTGGGAATGGAGTTGAAGGACATAACCATTCAGTCATTGTATGTTGAAATCATGGAGAGTGA
TTTCAGGGATCAGCAGATCATCGGTGATGTTTTAAGAAACCATGAACAGAATAGGCATTGTCTTGTTCTGACCCTGAGAA
CGGCTCACGTTGAGAAACTTGCTAAAATGATAAACGAACATGTTCCGAATGTGATCTCCCTGACAGGCGGCATGGGAAAG
AAGGGAACCCGAAAGGCTTTTGATCGCATCGCCGAAATTCCGGCAGACAAACCTTTTGTTCTGGTGGCAACCGGCCATTT
CATTGGTGAAGGGTTTGATGAGCCCCGTCTCGACACCCTGTTTCTGGCCATGCCTATATCCTGGAAAGGAACTCTGCAGC
AATACGCCGGAAGACTACACAGGCTGTGCAACTCAAAAAATGAGGTTAGGATTTACGATTATGTGGATATCCAGGTTCCC
ATGCTTGAAAGAATGTACCAGAAACGTCTGAACGGATACGCATCCATGGGGTATAAGGCCAAAGCAAGCGAGGTTATGGA
TGCCCCCATAGACATCATATTCTCCAAAGACAATTTCTTGCCGGTATTCACACAGGATATCATTGCCTCCCAAAAAGAGA
TTCTCATTGTCAGCCCGTTTATTCGGCAAAAACGAACAAGGCAAATGATCCACCACCTTAACGCAGCGAGCGGCGCCGGT
GTCCGCATTACCATCATCACCCGCCCTGAAGGGGATTTTCCGGAAAAGGATCATCCTCCATATCGAAAGGCTCTGGATCT
TCTATCAGAAAGCGGATTCGCCATAATGTACAAGTCAAACATCCACCAAAAATTTGCAATCATGGATCAAAAAATCGTTT
GGTATGGCAGCATTAACCTTTTAAGCTACGGAAACGCCCAAGAAAGTATGATGCGCATTGAAAGCGCCCATATCGCCAAT
GAGTTGATTAAGAGCATAGAAGACGGATAG

Protein sequence :
MNYYDLIKNFKSLLDEINRLKIENSQLRVELGLKPPQSLQASPLVVQTETMGHEDELRVESQSFAVNNSSDSPTKIRLFM
SLFKGREDVFAKRWESRKSGTGGYAPACLNQWRPGICGKPKLPCSKCSNTSYAELNETVIESHLRGHAVVGVYPMLQDET
CHFLAMDFDKANWEKDVAAVRDVCSEYTIPIAVERSRSGKGGHVWFFFEHPVSAGLARKFGAALLTRTMNKRHDLPFASY
DRLFPSQDTMPKGGLGNLIALPLQKAARENANSEFIDEHFRSYSDQWAFLSAIERMSQNRIECLITDLSPGDELGELKID
EEESKPWETKQPQTVLEKSDFPDKLEIVRGNMLFIPKEGMSQRALNRLKRLATFKNPMFYRQQAMRLPTYNYPRVISCSD
DTQGYLCLPRGCEPDLVYEIEKLDVSIKIIDKTYAGKRINVEFKGHLRDEQNLALSHLIQHDNGILSGTTAFGKTVVAIK
LIAEKKTNTLILVDKISLLTQWKKRLSEFLEINEPLPDESNGRRRKRHIIGQIGGGRNTSCGVIDIAVMQSLSRKGEVKE
IVRDYGLIIADECHHASAFTYEQILKKARAKYVYGLSATPVRKDGHQPILFMHCGPIRYRDNPKRQAESRPFDHYVIPRF
TSLRTPLGMELKDITIQSLYVEIMESDFRDQQIIGDVLRNHEQNRHCLVLTLRTAHVEKLAKMINEHVPNVISLTGGMGK
KGTRKAFDRIAEIPADKPFVLVATGHFIGEGFDEPRLDTLFLAMPISWKGTLQQYAGRLHRLCNSKNEVRIYDYVDIQVP
MLERMYQKRLNGYASMGYKAKASEVMDAPIDIIFSKDNFLPVFTQDIIASQKEILIVSPFIRQKRTRQMIHHLNAASGAG
VRITIITRPEGDFPEKDHPPYRKALDLLSESGFAIMYKSNIHQKFAIMDQKIVWYGSINLLSYGNAQESMMRIESAHIAN
ELIKSIEDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 9e-162 44
Z1568 NP_287072.1 helicase Not tested TAI Protein 9e-162 44