Gene Information

Name : Dalk_3434 (Dalk_3434)
Accession : YP_002432590.1
Strain : Desulfatibacillum alkenivorans AK-01
Genome accession: NC_011768
Putative virulence/resistance : Unknown
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4355510 - 4358098 bp
Length : 2589 bp
Strand : -
Note : KEGG: dol:Dole_2696 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGCGTTTTGACAAATTCACCATTAAGTCCCAGGAATTATTGGGCGAGGCCCAAAACCTGGCCGTCACCAAAGGGCACCA
ACAAATAGAGCCCGAGCACTTTGTCTCGGCCATGCTCATGGAAGACAAAGGCATGGCCCGGTCCATGTTTCGGAAAATGG
GCGTTTCCCCCGACGGCGTGGCCAATGAGTTCGCCGCACTGATAGAAAGGATGCCCAGAGTGAGCGGGGCCGGGGCGGGC
GAAAGCTATTTGTCCCCCAGGTCCAAGCAGGTCCTTCAAAACGCCATGGCCGAAGCCAGCAAAATGAAGGACGAATACGT
AAGCCTGGAGCACATCCTCCTGGCCATAGCCGACGAAAAGCATGGAGACGCCTCCCGTACTCTGGCGTCCCACGGCATTA
CCAAAGACACCCTGCTGAAGGTGCTCCAGAACATCCGAGGCTCCCAAAGGGTTACGGATCAGAACCCGGAAGAAAAATAT
CAGGCCCTGGAAAAATACTCCCGGGATCTGACCGAACTGGCCCGCATCGGCAAGCTGGATCCGGTCATCGGCCGGGACGA
CGAAATCCGCCGCATCGTCCAGGTGCTAAGCCGCCGCACCAAAAACAACCCGGTGCTCATCGGCGAACCCGGCGTGGGCA
AGACCGCCATTGTGGAAGGCCTGGCCCAGCGGATCGTGCGGGGCGACGTCTCCGAATCCCTGAAAAACCGCCGTCTCGTA
GCCCTGGACATGGGCTCCCTGATCGCTGGCGCCAAGTACCGCGGCGAGTTTGAAGACAGACTGAAAGCCGTGCTTAAGGA
AGTCGAGGACGCCGAAGGCGAAGTCATCCTCTTTATTGACGAAATGCACACCCTGGTCGGCGCGGGCGCAACCGAAGGCG
CCATGGACGCCTCCAATATGCTCAAGCCGGCCCTGGCCAGGGGCAGCCTGCGGTGCGTGGGCGCAACCACCCTGAACGAG
TACCGCAAGTACATCGAAAAGGACGCGGCCCTGGAGCGCAGGTTCGCCCCGGTTTTCGCGGCCGAGCCCACGGTGCAGGA
CACCATTTCCATCCTCCGCGGGCTTAAGGAAAAATATGAAGTTCACCACGGCGTGCGCATCACCGACGCCGCCATCGTGG
CCGCGGCCACCCTTTCGGACAGGTACATCTCGGATCGGTTCCTGCCCGATAAGGCCATCGACCTGGTGGACGAATGCGCC
TCCAAGCTGCGCATCGAAATCGACAGCATGCCCCAGGAAATCGATGAGGTGCAGCGCAGGATCACTCAGGCTCAGATCGA
GCGTCAGGCTTTGAAAAAAGAAAAGGACGCCGCCAGCAAGGAGCGCCTGGCCAAGCTGGAACTGGAAATCTCGGAAATGG
AAGAATCCATGCGCGAGATGAAATACCACTGGCAAAACGAAAAGGAAGCCATCGATGAAATCACCAGGATCAAGGAAACC
CAAGAGCGCCTCAGCATCGAGGAGGAACAGGCCGAGCGCCAGGGCGACCTGAACCGGGTGGCGGAACTCCGCTACGGCAA
GGCCAACGAACTCAAGCGGGCCATGGAACAGGCCCACGCCAAACTGGCGGAGCTGCAGAAGGACCGCAAAATGCTCAAGG
AAGAGGTGGACGACGAGGACGTGGCCGAGGTCGTGTCCCGCTGGACCGGCATTCCGGTTTCCAAAATGCTGGAAAGCGAA
AAGGAAAAGCTCGTCCGCATGGAAAGCCGTCTGGAAAAACGGGTGATCGGCCAAAACGACGCCATTGTGGCCGTATCCAA
CGCCGTGCGCCGCGCCCGGTCCGGCTTGCAGGACCCCAACCGCCCCATAGGCTCCTTTATTTTCATGGGCCCCACGGGCG
TGGGCAAGACCGAATTGGCCAAGGCCCTGGCCGAGTTCATCTTTGACGACGACCAAGCCATTGTCCGCGTGGACATGAGC
GAATACATGGAAAAACACTCGGTGTCGCGCCTCATCGGCGCCCCTCCGGGCTACGTGGGTTACGACGAAGGCGGATACCT
GACCGAGGCCGTCCGCCGCAGGCCCTACTCCGTCATCCTGTTTGACGAAATTGAAAAGGCGCACCCGGACGTATTCAACG
TGCTCCTGCAAATCCTGGATGACGGACGCATGACCGACGGACACGGCAAGACCGTGGACTTCAAGAACACCATCATCATC
ATGACGTCCAACGTGGGCAGCCAATTCATCCAGGATCTGGGATCCAGCAATCCCGAGGAAATGCGCCGGCGGGTCATGGA
CGCCTTACGCGCCACCTTCCGCCCCGAGTTCCTGAACAGGGTGGACGAAACCGTGATATTCAACAGCCTGAGCGTGGAAG
ACCTGGCCCAGGTGGTCAGAATTCAGACCGACCGCCTGATCAAACGCCTCACCGACCAGCACGTGAACCTGGTCATCACG
GAGGAAGCCTTGGTCCTTCTCGGACAAAAGGGCTACGACCCTGCATACGGCGCCCGGCCGCTCAAGAGGGTCATCCAGCG
CAGCCTGGAAAACCAGCTCGCCCTCCTCATCCTGGAAGGCAAGATCCACCCGGACTCCACCGTCACCGTGGACGCCCAGG
GCGACGACATTGTCTTCAACTTCGGCTAA

Protein sequence :
MRFDKFTIKSQELLGEAQNLAVTKGHQQIEPEHFVSAMLMEDKGMARSMFRKMGVSPDGVANEFAALIERMPRVSGAGAG
ESYLSPRSKQVLQNAMAEASKMKDEYVSLEHILLAIADEKHGDASRTLASHGITKDTLLKVLQNIRGSQRVTDQNPEEKY
QALEKYSRDLTELARIGKLDPVIGRDDEIRRIVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVSESLKNRRLV
ALDMGSLIAGAKYRGEFEDRLKAVLKEVEDAEGEVILFIDEMHTLVGAGATEGAMDASNMLKPALARGSLRCVGATTLNE
YRKYIEKDAALERRFAPVFAAEPTVQDTISILRGLKEKYEVHHGVRITDAAIVAAATLSDRYISDRFLPDKAIDLVDECA
SKLRIEIDSMPQEIDEVQRRITQAQIERQALKKEKDAASKERLAKLELEISEMEESMREMKYHWQNEKEAIDEITRIKET
QERLSIEEEQAERQGDLNRVAELRYGKANELKRAMEQAHAKLAELQKDRKMLKEEVDDEDVAEVVSRWTGIPVSKMLESE
KEKLVRMESRLEKRVIGQNDAIVAVSNAVRRARSGLQDPNRPIGSFIFMGPTGVGKTELAKALAEFIFDDDQAIVRVDMS
EYMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRMTDGHGKTVDFKNTIII
MTSNVGSQFIQDLGSSNPEEMRRRVMDALRATFRPEFLNRVDETVIFNSLSVEDLAQVVRIQTDRLIKRLTDQHVNLVIT
EEALVLLGQKGYDPAYGARPLKRVIQRSLENQLALLILEGKIHPDSTVTVDAQGDDIVFNFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-112 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-103 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-103 41