|
Name : Dalk_1816 (Dalk_1816) Accession : YP_002430981.1 Strain : Desulfatibacillum alkenivorans AK-01 Genome accession: NC_011768 Putative virulence/resistance : Virulence Product : Fis family PAS modulated sigma54 specific transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 2382696 - 2384084 bp Length : 1389 bp Strand : - Note : KEGG: dde:Dde_0659 Fis family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain prote DNA sequence : ATGCTTAAACAGGACTGGAACAGCTATTGGAAAACCGTGGTGGACACCATCCACGACGGCGTGATGATTGTGGATAACCA GGGCGTGGTGGTGAGCATCAACAGAGGCATGGAGAGAATCAGCGGCTTCAAGGCCGGGGAGATGGTGGGGAAGTCGTGCA CCATGCTTAACTGCGATATCTGCGAAATCGCCCAAAAAGACGGGGGCGGGCACTGGTGCGCTTTGTTCGCCACAGGGCGG ATCAACGAACGCCGCTGCAACATTGTACGAAGGGACGGCAAGACCTTTCCTGTATTGAAAAACGCCTCGCTGTTAAAAGA CTCCGAGGGTGAAACCATCGGTGCGGTGGAGACCATCACCGACATCTCGGAACTGATCGAGAAGGATAATCGCATCCAGG AATACCAGCGCGAGTTGCGCAGGGAGGACGGTTTCTTCGGGCTGATCGGCCAATCCGAGCCCATGGGCAGGATATTCTCC CTGATCCGGGATGCGGCCGGATCTGACGCGCCCGTGATTATTTACGGAGAATCGGGGACGGGCAAGGAGTTGGCGGCCCG AGCCATCCACAACAGCCGGGATCCCCAAAAGCCCTTTGTGGCGGTCAACTGCGCAGCTTTGAACGAGCAATTGCTGGAAA GCGAGTTGTTCGGGCACGAAAAAGGCGCTTTCACCGGAGCGGACAAAAAGCGTACAGGCCGGTTTGAAGCGGCGCACGGA GGCGCGATTTTTTTGGACGAGGTCGGAGACTTGCCGCTGAGCACACAGGTCAAGCTGCTTAGGGTGCTGGAGCAAAAAGT CATTGAACGGGTGGGGTCCAGCAAGTCAATCCCCATTGACGTTCGCGTGATTTCAGCCACCAACCGGGATCTCGACCAAA TGGTCAGAGAGGGCCGGTTTCGACAGGATTTGTATTATCGGTTAAACGTCATTCCCGTCCACTTGCCTCCCTTGCGGGAG CGGAGGGAGGACATCCCCCTCTTGTCCACCCATTTTTTAACCAGGGCGCGCTTGAAAAGCGGCAAAAACATTACGGGCAT ATCCAACGAAGCCCTGCGTATGATCGTAAACCACCTGTGGCCGGGAAATGTTCGGGAGCTGAAAAGCGCCTTTGAATACG CCTTTGTAACCTGTCATGACGACTTGATTGAACCCCGCCACCTGCCCCCGGTCGTGGCCGGAGCGCCCCTTGCGGACTGC CGGGAGCCGGCGCCCGCGGAGAAATACCAGAGCCCGGACGACAGGGCCAGGACCGAACTCATCGAGGCCTTGGAAAAATC CAACGGCAACCAGACCGAAGCGGCCAAACTGCTTGGAGTCTCCCGGGTGACGGTCTGGAACAGGATGAAGCGATACGGAG TGGATCTGAAAAGCGTGGTGAACAGGTGA Protein sequence : MLKQDWNSYWKTVVDTIHDGVMIVDNQGVVVSINRGMERISGFKAGEMVGKSCTMLNCDICEIAQKDGGGHWCALFATGR INERRCNIVRRDGKTFPVLKNASLLKDSEGETIGAVETITDISELIEKDNRIQEYQRELRREDGFFGLIGQSEPMGRIFS LIRDAAGSDAPVIIYGESGTGKELAARAIHNSRDPQKPFVAVNCAALNEQLLESELFGHEKGAFTGADKKRTGRFEAAHG GAIFLDEVGDLPLSTQVKLLRVLEQKVIERVGSSKSIPIDVRVISATNRDLDQMVREGRFRQDLYYRLNVIPVHLPPLRE RREDIPLLSTHFLTRARLKSGKNITGISNEALRMIVNHLWPGNVRELKSAFEYAFVTCHDDLIEPRHLPPVVAGAPLADC REPAPAEKYQSPDDRARTELIEALEKSNGNQTEAAKLLGVSRVTVWNRMKRYGVDLKSVVNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 3e-51 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 3e-51 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dalk_1816 | YP_002430981.1 | Fis family PAS modulated sigma54 specific transcriptional regulator | BAC0089 | Protein | 2e-63 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dalk_1816 | YP_002430981.1 | Fis family PAS modulated sigma54 specific transcriptional regulator | VFG0116 | Protein | 1e-54 | 42 |
