Gene Information

Name : AFE_0618 (AFE_0618)
Accession : YP_002425107.1
Strain : Acidithiobacillus ferrooxidans ATCC 23270
Genome accession: NC_011761
Putative virulence/resistance : Unknown
Product : UDP-glucose/GDP-mannose dehydrogenase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 551275 - 552579 bp
Length : 1305 bp
Strand : +
Note : identified by match to protein family HMM PF00070; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026

DNA sequence :
ATGAAGCACATCGTAGTCATTGGTGTCGGGTATGTAGGGTTGACGACTGCGGCCTTCCTGGCCGAGTTAGGGCACCACGT
CACAGGAGTGGACATGGACGAAGGGAAGATCGTCCTGCTGCGTCAGGGCCGGATTCCCTTCATTGAACCAGAGCTTCCCG
AACTGGTGGAGCGGAACGTCCGGGCCGGTCGCCTCAATTTCACCACCTCTTGCCAGAAAGCCATGCCGCATGCAGATATG
GCCTTCATCTGCGTCGGCACGCCACCGACTCCCAGCGGACATGCCGACATGAGTCAGGTGGAAGAAGCCGCCCGGCAGGT
TGCCCTCGCGGCGACGCAGCCCCTTATCGTCGTCCTCAAGAGCACCACCCCTCCCGGCGGAAATGCTGAGCGCGTGGCCG
CCATCCTGGCAAGCCATCTGTCGCCGGGAATGGATGCCCCGCTGGTCGTCAACCCCGAATTTCTCCGCGAAGGATCGGCG
GTATATGACACCTTCCACCCGGATCGTGCCGTGATCGGTGCCTGGGACAGCGCGGCTGCAGAAGAAGTGGCGGCGTTGTA
TGCCCCCCTGCGCTGCCCCGTTCTCCTGACGGACCCGGCCAGCGCCCAACTCACCAAATATGCCTCCAACGCCTTCCTGG
CCACCAAGATCTCTTTCATCAACGAGATATCCCGTATTGCCGAGCGGGTAGGGGCCAATATCCATGCCATTGCCCAAGGC
ATGGGGTTCGACGAGCGCATTGGCGCCGAATTCCTGGAGTCCGGCCTTGGCTACGGGGGCTCCTGCTTCCCCAAGGACGT
CCTGGCCCTGTCCGCCATTGCGGAACAGCAGGGGTATTATTCGCAATTTCTGCATGCGGTCACGGACATCAATGCCGGCC
AGTGCAGTCTCGCCGTCGAGAAACTCGGTGACGCACTGGGGGGGTTCCACGGCAAGGCGGTATGCGTTCTCGGGCTGGCT
TTCAAACCACAGACCGACGACGTGCGCGAGTCACCCGCCTTATCCGTGATTTCCATGCTTTGCCGGCAGGGCGCTGTTGT
CCAGGCCTATGACCCGGCCGCCATGTCTACCGCGCAAAAAGTGCTGCCACCCCATGCTGCCCTGGAATATTGCGCCGATG
CCTATGCTGCGGCGCTGGGTTGTCATGCCGTCCTGATCGCCACCAACTGGCCGGAATTTCGCAGCCTCGACTGGTCGCAC
ATCCATTCTTCGATGGCGGGTAAGGCGGTCATGGACGGTCGTGGTTTGCTTTCACCGGATGAGATGCGCGGCATGGGGTT
CGAATATCTGGCCTTCGCCAACTAG

Protein sequence :
MKHIVVIGVGYVGLTTAAFLAELGHHVTGVDMDEGKIVLLRQGRIPFIEPELPELVERNVRAGRLNFTTSCQKAMPHADM
AFICVGTPPTPSGHADMSQVEEAARQVALAATQPLIVVLKSTTPPGGNAERVAAILASHLSPGMDAPLVVNPEFLREGSA
VYDTFHPDRAVIGAWDSAAAEEVAALYAPLRCPVLLTDPASAQLTKYASNAFLATKISFINEISRIAERVGANIHAIAQG
MGFDERIGAEFLESGLGYGGSCFPKDVLALSAIAEQQGYYSQFLHAVTDINAGQCSLAVEKLGDALGGFHGKAVCVLGLA
FKPQTDDVRESPALSVISMLCRQGAVVQAYDPAAMSTAQKVLPPHAALEYCADAYAAALGCHAVLIATNWPEFRSLDWSH
IHSSMAGKAVMDGRGLLSPDEMRGMGFEYLAFAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-47 44
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-47 44
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-47 44