|
Name : AFE_0618 (AFE_0618) Accession : YP_002425107.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : UDP-glucose/GDP-mannose dehydrogenase family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : - Position : 551275 - 552579 bp Length : 1305 bp Strand : + Note : identified by match to protein family HMM PF00070; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 DNA sequence : ATGAAGCACATCGTAGTCATTGGTGTCGGGTATGTAGGGTTGACGACTGCGGCCTTCCTGGCCGAGTTAGGGCACCACGT CACAGGAGTGGACATGGACGAAGGGAAGATCGTCCTGCTGCGTCAGGGCCGGATTCCCTTCATTGAACCAGAGCTTCCCG AACTGGTGGAGCGGAACGTCCGGGCCGGTCGCCTCAATTTCACCACCTCTTGCCAGAAAGCCATGCCGCATGCAGATATG GCCTTCATCTGCGTCGGCACGCCACCGACTCCCAGCGGACATGCCGACATGAGTCAGGTGGAAGAAGCCGCCCGGCAGGT TGCCCTCGCGGCGACGCAGCCCCTTATCGTCGTCCTCAAGAGCACCACCCCTCCCGGCGGAAATGCTGAGCGCGTGGCCG CCATCCTGGCAAGCCATCTGTCGCCGGGAATGGATGCCCCGCTGGTCGTCAACCCCGAATTTCTCCGCGAAGGATCGGCG GTATATGACACCTTCCACCCGGATCGTGCCGTGATCGGTGCCTGGGACAGCGCGGCTGCAGAAGAAGTGGCGGCGTTGTA TGCCCCCCTGCGCTGCCCCGTTCTCCTGACGGACCCGGCCAGCGCCCAACTCACCAAATATGCCTCCAACGCCTTCCTGG CCACCAAGATCTCTTTCATCAACGAGATATCCCGTATTGCCGAGCGGGTAGGGGCCAATATCCATGCCATTGCCCAAGGC ATGGGGTTCGACGAGCGCATTGGCGCCGAATTCCTGGAGTCCGGCCTTGGCTACGGGGGCTCCTGCTTCCCCAAGGACGT CCTGGCCCTGTCCGCCATTGCGGAACAGCAGGGGTATTATTCGCAATTTCTGCATGCGGTCACGGACATCAATGCCGGCC AGTGCAGTCTCGCCGTCGAGAAACTCGGTGACGCACTGGGGGGGTTCCACGGCAAGGCGGTATGCGTTCTCGGGCTGGCT TTCAAACCACAGACCGACGACGTGCGCGAGTCACCCGCCTTATCCGTGATTTCCATGCTTTGCCGGCAGGGCGCTGTTGT CCAGGCCTATGACCCGGCCGCCATGTCTACCGCGCAAAAAGTGCTGCCACCCCATGCTGCCCTGGAATATTGCGCCGATG CCTATGCTGCGGCGCTGGGTTGTCATGCCGTCCTGATCGCCACCAACTGGCCGGAATTTCGCAGCCTCGACTGGTCGCAC ATCCATTCTTCGATGGCGGGTAAGGCGGTCATGGACGGTCGTGGTTTGCTTTCACCGGATGAGATGCGCGGCATGGGGTT CGAATATCTGGCCTTCGCCAACTAG Protein sequence : MKHIVVIGVGYVGLTTAAFLAELGHHVTGVDMDEGKIVLLRQGRIPFIEPELPELVERNVRAGRLNFTTSCQKAMPHADM AFICVGTPPTPSGHADMSQVEEAARQVALAATQPLIVVLKSTTPPGGNAERVAAILASHLSPGMDAPLVVNPEFLREGSA VYDTFHPDRAVIGAWDSAAAEEVAALYAPLRCPVLLTDPASAQLTKYASNAFLATKISFINEISRIAERVGANIHAIAQG MGFDERIGAEFLESGLGYGGSCFPKDVLALSAIAEQQGYYSQFLHAVTDINAGQCSLAVEKLGDALGGFHGKAVCVLGLA FKPQTDDVRESPALSVISMLCRQGAVVQAYDPAAMSTAQKVLPPHAALEYCADAYAAALGCHAVLIATNWPEFRSLDWSH IHSSMAGKAVMDGRGLLSPDEMRGMGFEYLAFAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-47 | 44 |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-47 | 44 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-47 | 44 |
