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Name : AFE_0609 (AFE_0609) Accession : YP_002425098.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 541415 - 542428 bp Length : 1014 bp Strand : - Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGAGCAGGCGGATTCTCGTCACCGGTGCCGCCGGCTTCATCGGCTACCACCTGTGCCGCCGTCTATTGACCGAAGGGTG GATCGTGCATGGTCTTGATAACCTCAACGCCTATTATGACCCCGCCCTCAAGCGGGATCGCCTGGCGCATCTGGAAAACC ATCCGGACTTTCAATTCCACACCGTGGATCTTGCCGATCGGGAGGCCATGACAGGCCTCTTCGCCGGGCCACATTTTGAT GTGGTGGTGAATCTTGCGGCCCAGGCGGGCGTCCGCCATTCCCTCCAGGATCCCGCCGCTTATGTCGACAGCAATCTGGT CGGTTTCGCCAATGTTCTGGAGGGCTGTCGCGCCCAGGCCGTGGACCATCTGCTTTTCGCCTCCTCCAGTTCGGTCTATG GCGCCAACGCCCGCCTGCCTTACAGCGTCCATGACGGGGTCGATCATCCGCTCAGCCTCTACGCCGCCAGCAAGCGGGCC GGCGAACTCATGGCCCATAGCTATGCACATCTCTTCGGCATTCCCTGCACCGGTTTGCGTTTTTTCACGGTCTACGGACC GTGGGGCCGACCGGACATGGCCTATTTTCGTTTCACGCGCCAGATCCTTGCCGGAGAGCCTATCCCCGTCTTCAATCATG GTCAGATGCGCCGGGATTTTACCTATATCGACGACGTCATCGAAGGCGTGGTACGGCTCCTGGACTTCGCACCGCGCCCT GCTCCGATGTCGACGGAGCGGCCGGATCCGAGCACCAGCGATGCCCCCTTCCGTCTTTACAATATTGGCAACCATACCCC TGTAGCCCTGCTGGATTTCATCGCGATCCTGGAGGATCTGCTGGCGCGCAAGGCCGACATCGAATGGCTGCCCATGCAGG CCGGGGACGTTATTGCCACCTATGCCGATGTGGGTGAATTGCAGGAGGCGGTGGGTTTTTCCCCCGCCACCCCCTTGCGT GATGGTCTTGCCCGTTTCATCGACTGGTATCGGAGTTATTACGACGCATCTTGA Protein sequence : MSRRILVTGAAGFIGYHLCRRLLTEGWIVHGLDNLNAYYDPALKRDRLAHLENHPDFQFHTVDLADREAMTGLFAGPHFD VVVNLAAQAGVRHSLQDPAAYVDSNLVGFANVLEGCRAQAVDHLLFASSSSVYGANARLPYSVHDGVDHPLSLYAASKRA GELMAHSYAHLFGIPCTGLRFFTVYGPWGRPDMAYFRFTRQILAGEPIPVFNHGQMRRDFTYIDDVIEGVVRLLDFAPRP APMSTERPDPSTSDAPFRLYNIGNHTPVALLDFIAILEDLLARKADIEWLPMQAGDVIATYADVGELQEAVGFSPATPLR DGLARFIDWYRSYYDAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-88 | 50 |
